Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRAV34A0A0B4J273 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV34A0A0B4J273 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
TRAV34A0A0B4J273 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV34A0A0B4J273 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAV34A0A0B4J273 AC026310.3-201ENST00000625186 2373 ntBASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAV34A0A0B4J273 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 AL592293.1-201ENST00000502889 1188 ntBASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRAV34A0A0B4J273 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TRAV34A0A0B4J273 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
TRAV34A0A0B4J273 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
TRAV34A0A0B4J273 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 AC087742.1-201ENST00000575880 1738 ntBASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 MIR6765-201ENST00000614092 87 ntBASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 AC073130.3-201ENST00000624389 2278 ntBASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRAV34A0A0B4J273 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 AC011551.1-201ENST00000614101 683 ntBASIC16.82■□□□□ 0.28
TRAV34A0A0B4J273 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms