Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AL591424.3-201ENST00000614278 872 ntBASIC13.68□□□□□ -0.22
LMO3Q8TAP4 LINC02348-201ENST00000618724 489 ntTSL 4 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 MYT1-205ENST00000622439 2140 ntTSL 5 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AC016526.4-201ENST00000636059 517 ntTSL 3 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 AC099795.2-201ENST00000639582 440 ntBASIC13.68□□□□□ -0.22
LMO3Q8TAP4 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 EEF1AKMT3-202ENST00000333012 2762 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 MSR1-205ENST00000445506 1513 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 CLCC1-207ENST00000369976 2468 ntTSL 2 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 ZNF749-201ENST00000334181 2587 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 RINT1-201ENST00000257700 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LMO3Q8TAP4 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 SALL4P1-201ENST00000510352 1860 ntBASIC13.67□□□□□ -0.22
LMO3Q8TAP4 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 AL031590.1-202ENST00000641466 1737 ntBASIC13.67□□□□□ -0.22
LMO3Q8TAP4 CA6-203ENST00000377443 1319 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 TSTA3-210ENST00000529064 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 C1orf198-203ENST00000470540 3819 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 KCNAB1-203ENST00000389636 1806 ntTSL 2 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 ZNF274-201ENST00000326804 2447 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 CDCA4P4-201ENST00000435216 680 ntBASIC13.67□□□□□ -0.22
LMO3Q8TAP4 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 AC083801.1-201ENST00000491689 358 ntBASIC13.67□□□□□ -0.22
LMO3Q8TAP4 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC13.67□□□□□ -0.22
LMO3Q8TAP4 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 WASH7P-201ENST00000488147 1351 ntBASIC13.67□□□□□ -0.22
LMO3Q8TAP4 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 RPUSD4-208ENST00000533628 2053 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LMO3Q8TAP4 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 FP325332.1-201ENST00000624818 2045 ntBASIC13.66□□□□□ -0.22
LMO3Q8TAP4 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 ACO2-202ENST00000396512 2811 ntTSL 5 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 DNASE1L1-205ENST00000369809 3008 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 PPP2R1B-202ENST00000341980 1953 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AP000897.1-201ENST00000584036 1613 ntBASIC13.66□□□□□ -0.22
LMO3Q8TAP4 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 SCLT1-202ENST00000439369 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AC244197.1-201ENST00000456494 951 ntBASIC13.66□□□□□ -0.22
LMO3Q8TAP4 CMC2-202ENST00000486645 766 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 MARK2P17-201ENST00000498560 841 ntBASIC13.66□□□□□ -0.22
LMO3Q8TAP4 RPL30P11-202ENST00000509114 358 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AP000894.1-201ENST00000584430 520 ntBASIC13.66□□□□□ -0.22
LMO3Q8TAP4 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
LMO3Q8TAP4 AL355388.2-201ENST00000610146 2157 ntTSL 4 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms