Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
O00370 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC13.82□□□□□ -0.2
O00370 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 LILRP2-202ENST00000413572 1383 ntBASIC13.82□□□□□ -0.2
O00370 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC13.82□□□□□ -0.2
O00370 AC092139.4-201ENST00000624318 2794 ntBASIC13.82□□□□□ -0.2
O00370 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
O00370 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
O00370 POFUT2-203ENST00000349485 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 GBP1P1-201ENST00000394662 1740 ntBASIC13.81□□□□□ -0.2
O00370 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 AC011481.3-201ENST00000623895 5594 ntBASIC13.81□□□□□ -0.2
O00370 FAM226B-201ENST00000602508 1490 ntBASIC13.81□□□□□ -0.2
O00370 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.81□□□□□ -0.2
O00370 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC13.81□□□□□ -0.2
O00370 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC13.81□□□□□ -0.2
O00370 KCTD21-AS1-207ENST00000600795 1549 ntBASIC13.81□□□□□ -0.2
O00370 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC13.81□□□□□ -0.2
O00370 PYGO2-202ENST00000368457 3146 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC13.81□□□□□ -0.2
O00370 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 TACC1-209ENST00000520611 1550 ntTSL 2 BASIC13.81□□□□□ -0.2
O00370 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC13.81□□□□□ -0.2
O00370 GZMH-202ENST00000382548 687 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
O00370 MYH9-202ENST00000401701 789 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC13.81□□□□□ -0.2
O00370 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC13.81□□□□□ -0.2
O00370 HLA-DPA2-205ENST00000433582 733 ntBASIC13.81□□□□□ -0.2
O00370 FAM157A-201ENST00000437428 1141 ntTSL 3 BASIC13.81□□□□□ -0.2
O00370 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC13.81□□□□□ -0.2
O00370 VPS33A-202ENST00000451053 1154 ntTSL 3 BASIC13.81□□□□□ -0.2
O00370 RNU1-80P-201ENST00000459500 161 ntBASIC13.81□□□□□ -0.2
O00370 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC13.81□□□□□ -0.2
O00370 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC13.81□□□□□ -0.2
O00370 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC13.81□□□□□ -0.2
O00370 AC010503.4-201ENST00000615487 688 ntBASIC13.81□□□□□ -0.2
O00370 MME-218ENST00000625667 363 ntTSL 5 BASIC13.81□□□□□ -0.2
O00370 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
O00370 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC13.81□□□□□ -0.2
O00370 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 CEACAM20-201ENST00000611497 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
O00370 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
O00370 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC13.8□□□□□ -0.2
O00370 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
O00370 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 CCDC33-206ENST00000558821 1993 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 AL135960.1-201ENST00000422216 4036 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 IP6K2-221ENST00000449610 1673 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
O00370 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 SNORA30.1-201ENST00000363193 129 ntBASIC13.8□□□□□ -0.2
O00370 COX20P1-201ENST00000366529 357 ntBASIC13.8□□□□□ -0.2
O00370 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 AC092570.1-201ENST00000414446 469 ntBASIC13.8□□□□□ -0.2
O00370 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC13.8□□□□□ -0.2
O00370 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 AL929302.1-201ENST00000426556 871 ntBASIC13.8□□□□□ -0.2
O00370 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.8□□□□□ -0.2
O00370 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
O00370 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC13.8□□□□□ -0.2
O00370 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
O00370 HNRNPA1P55-201ENST00000505935 955 ntBASIC13.8□□□□□ -0.2
O00370 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
O00370 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC13.8□□□□□ -0.2
O00370 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC13.8□□□□□ -0.2
O00370 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC13.8□□□□□ -0.2
O00370 AC048382.6-201ENST00000621980 1223 ntBASIC13.8□□□□□ -0.2
O00370 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC13.8□□□□□ -0.2
O00370 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC13.8□□□□□ -0.2
O00370 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms