Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CLK1P49759 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.33□□□□□ -0.44
CLK1P49759 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.33□□□□□ -0.44
CLK1P49759 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC12.33□□□□□ -0.44
CLK1P49759 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 FGFR3P1-201ENST00000449999 601 ntBASIC12.33□□□□□ -0.44
CLK1P49759 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC12.33□□□□□ -0.44
CLK1P49759 RPS23-204ENST00000507980 836 ntTSL 2 BASIC12.33□□□□□ -0.44
CLK1P49759 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC12.33□□□□□ -0.44
CLK1P49759 RHOQP1-201ENST00000555758 579 ntBASIC12.33□□□□□ -0.44
CLK1P49759 AC007952.4-201ENST00000573866 637 ntBASIC12.33□□□□□ -0.44
CLK1P49759 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC12.33□□□□□ -0.44
CLK1P49759 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.33□□□□□ -0.44
CLK1P49759 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
CLK1P49759 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.33□□□□□ -0.44
CLK1P49759 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 ADD1-207ENST00000446856 3745 ntTSL 5 BASIC12.33□□□□□ -0.44
CLK1P49759 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
CLK1P49759 BRD1-202ENST00000404034 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC12.33□□□□□ -0.44
CLK1P49759 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 NSD2-205ENST00000382892 7706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 DGKZP1-201ENST00000378718 2776 ntBASIC12.33□□□□□ -0.44
CLK1P49759 ANXA11-202ENST00000372231 6720 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 AC080128.2-201ENST00000641520 11863 ntBASIC12.33□□□□□ -0.44
CLK1P49759 INO80-211ENST00000616814 4272 ntTSL 5 BASIC12.33□□□□□ -0.44
CLK1P49759 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 SPAG8-201ENST00000340291 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
CLK1P49759 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
CLK1P49759 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.32□□□□□ -0.44
CLK1P49759 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 AC090502.4-201ENST00000551714 1386 ntBASIC12.32□□□□□ -0.44
CLK1P49759 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CLK1P49759 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC12.32□□□□□ -0.44
CLK1P49759 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 DNM3-206ENST00000520906 4454 ntTSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 BLZF1-201ENST00000329281 2300 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 NFXL1-202ENST00000381538 3728 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
CLK1P49759 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 AL109976.1-201ENST00000621919 5678 ntBASIC12.32□□□□□ -0.44
CLK1P49759 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 ATXN10-201ENST00000252934 3329 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 AC041040.1-201ENST00000425197 460 ntBASIC12.32□□□□□ -0.44
CLK1P49759 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.32□□□□□ -0.44
CLK1P49759 DPY19L2P5-201ENST00000456300 331 ntBASIC12.32□□□□□ -0.44
CLK1P49759 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC12.32□□□□□ -0.44
CLK1P49759 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
CLK1P49759 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 AC068867.1-201ENST00000559855 150 ntBASIC12.32□□□□□ -0.44
CLK1P49759 DNM1P30-201ENST00000563586 452 ntBASIC12.32□□□□□ -0.44
CLK1P49759 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.32□□□□□ -0.44
CLK1P49759 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
CLK1P49759 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CLK1P49759 ST5-261ENST00000626808 1071 ntTSL 5 BASIC12.32□□□□□ -0.44
CLK1P49759 AL805961.1-201ENST00000642026 753 ntBASIC12.32□□□□□ -0.44
CLK1P49759 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
CLK1P49759 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 PKD1L2-210ENST00000533478 5669 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC12.32□□□□□ -0.44
CLK1P49759 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
CLK1P49759 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC12.32□□□□□ -0.44
CLK1P49759 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms