Protein–RNA interactions for Protein: Q9Y3F1

Putative TAP2-associated 6.5 kDa polypeptide, humanhuman

Predictions only

Length 56 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9Y3F1 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q9Y3F1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.06□□□□□ -0.16
Q9Y3F1 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Q9Y3F1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q9Y3F1 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Q9Y3F1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q9Y3F1 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Q9Y3F1 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Q9Y3F1 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC14.05□□□□□ -0.16
Q9Y3F1 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.05□□□□□ -0.16
Q9Y3F1 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 SNU13-203ENST00000401959 1670 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Q9Y3F1 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC14.05□□□□□ -0.16
Q9Y3F1 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC14.05□□□□□ -0.16
Q9Y3F1 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Q9Y3F1 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 COQ5-202ENST00000445328 992 ntTSL 2 BASIC14.05□□□□□ -0.16
Q9Y3F1 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC14.05□□□□□ -0.16
Q9Y3F1 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Q9Y3F1 AC068987.2-201ENST00000565518 896 ntBASIC14.05□□□□□ -0.16
Q9Y3F1 SKAP1-AS1-201ENST00000582246 687 ntTSL 2 BASIC14.05□□□□□ -0.16
Q9Y3F1 AFMID-205ENST00000586731 550 ntTSL 3 BASIC14.05□□□□□ -0.16
Q9Y3F1 MXRA7-206ENST00000589082 560 ntAPPRIS ALT2 TSL 4 BASIC14.05□□□□□ -0.16
Q9Y3F1 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 AC092329.1-201ENST00000594653 574 ntTSL 5 BASIC14.05□□□□□ -0.16
Q9Y3F1 ZNF544-209ENST00000596929 543 ntTSL 4 BASIC14.05□□□□□ -0.16
Q9Y3F1 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC14.05□□□□□ -0.16
Q9Y3F1 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Q9Y3F1 PDLIM1P1-201ENST00000604187 969 ntBASIC14.05□□□□□ -0.16
Q9Y3F1 Metazoa_SRP.59-201ENST00000621376 277 ntBASIC14.05□□□□□ -0.16
Q9Y3F1 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.05□□□□□ -0.16
Q9Y3F1 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 AC008676.1-201ENST00000508443 1932 ntTSL 5 BASIC14.05□□□□□ -0.16
Q9Y3F1 COX6B2-205ENST00000588572 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 ELMO2-201ENST00000290246 3669 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q9Y3F1 LINC00563-201ENST00000566370 1400 ntBASIC14.05□□□□□ -0.16
Q9Y3F1 TP53TG3B-201ENST00000341305 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Q9Y3F1 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Q9Y3F1 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Q9Y3F1 SUPT20HL1-201ENST00000436466 2618 ntBASIC14.05□□□□□ -0.16
Q9Y3F1 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC14.05□□□□□ -0.16
Q9Y3F1 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.05□□□□□ -0.16
Q9Y3F1 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Q9Y3F1 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.04□□□□□ -0.16
Q9Y3F1 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 ST20-AS1-201ENST00000560255 4223 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Q9Y3F1 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Q9Y3F1 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Q9Y3F1 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 AC126564.1-201ENST00000623628 2013 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 IMMP1L-201ENST00000278200 795 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Q9Y3F1 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 MIR219A2-202ENST00000385220 97 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 SOD1-202ENST00000389995 865 ntTSL 3 BASIC14.04□□□□□ -0.16
Q9Y3F1 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC14.04□□□□□ -0.16
Q9Y3F1 AC007322.2-201ENST00000414540 605 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 AC009237.11-201ENST00000425635 265 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC14.04□□□□□ -0.16
Q9Y3F1 AC018511.1-201ENST00000436608 380 ntTSL 5 BASIC14.04□□□□□ -0.16
Q9Y3F1 TPRG1-AS1-201ENST00000444488 697 ntTSL 3 BASIC14.04□□□□□ -0.16
Q9Y3F1 AC018892.1-201ENST00000451098 265 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 XIAP-AS1-201ENST00000458331 482 ntTSL 3 BASIC14.04□□□□□ -0.16
Q9Y3F1 RN7SL225P-201ENST00000464648 298 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC14.04□□□□□ -0.16
Q9Y3F1 AC138035.2-201ENST00000509192 727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Q9Y3F1 AC233724.7-201ENST00000511476 253 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 ALG1L14P-201ENST00000514230 434 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 SNORA74.2-201ENST00000516496 180 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 IGHV1OR16-2-201ENST00000564937 349 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 AC140658.2-201ENST00000566360 348 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 IGHV2OR16-5-201ENST00000567458 358 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Q9Y3F1 MYL4-208ENST00000572316 850 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Q9Y3F1 MIR3177-201ENST00000578255 82 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 MIR4296-201ENST00000581038 88 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 MIR4459-201ENST00000581837 66 ntBASIC14.04□□□□□ -0.16
Q9Y3F1 WSB1-213ENST00000583193 552 ntTSL 4 BASIC14.04□□□□□ -0.16
Q9Y3F1 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms