Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 AC020741.1-201ENST00000381217 2079 ntTSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 SEC13-203ENST00000383801 1479 ntTSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 AC080013.1-204ENST00000607426 2185 ntBASIC12.39□□□□□ -0.43
CLK1P49759 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC12.39□□□□□ -0.43
CLK1P49759 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CLK1P49759 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 MAN2B1-201ENST00000221363 3170 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 TXNDC2-202ENST00000357775 2830 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 AL357054.4-201ENST00000606285 2814 ntBASIC12.38□□□□□ -0.43
CLK1P49759 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 NBPF17P-201ENST00000401087 2119 ntBASIC12.38□□□□□ -0.43
CLK1P49759 UBTFL8-201ENST00000426903 2112 ntBASIC12.38□□□□□ -0.43
CLK1P49759 RMND5B-210ENST00000515098 4066 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC12.38□□□□□ -0.43
CLK1P49759 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 LINC00052-201ENST00000560153 1966 ntTSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 DMBX1-201ENST00000360032 2880 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 KDM6A-214ENST00000621147 2876 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC12.38□□□□□ -0.43
CLK1P49759 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12.38□□□□□ -0.43
CLK1P49759 PKP4P1-201ENST00000426801 2158 ntBASIC12.38□□□□□ -0.43
CLK1P49759 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.38□□□□□ -0.43
CLK1P49759 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 NOC2LP1-201ENST00000450578 752 ntBASIC12.38□□□□□ -0.43
CLK1P49759 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.38□□□□□ -0.43
CLK1P49759 STK24P1-201ENST00000455035 1291 ntBASIC12.38□□□□□ -0.43
CLK1P49759 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CLK1P49759 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC12.38□□□□□ -0.43
CLK1P49759 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.38□□□□□ -0.43
CLK1P49759 LINC00244-201ENST00000625073 613 ntBASIC12.38□□□□□ -0.43
CLK1P49759 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 RNF144B-201ENST00000259939 5036 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 MTRF1L-203ENST00000367233 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CLK1P49759 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CLK1P49759 ADAM8-202ENST00000445355 3279 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.43
CLK1P49759 DDO-201ENST00000368923 1953 ntTSL 2 BASIC12.38□□□□□ -0.43
CLK1P49759 EGLN3-205ENST00000547327 2849 ntBASIC12.38□□□□□ -0.43
CLK1P49759 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CLK1P49759 PISD-203ENST00000397500 2194 ntTSL 5 BASIC12.37□□□□□ -0.43
CLK1P49759 AC091170.1-201ENST00000582983 2190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
CLK1P49759 CLINT1-206ENST00000523094 3987 ntTSL 2 BASIC12.37□□□□□ -0.43
CLK1P49759 MYCNOS-202ENST00000641263 1313 ntBASIC12.37□□□□□ -0.43
CLK1P49759 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
CLK1P49759 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CLK1P49759 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 CLTC-215ENST00000621829 8587 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
CLK1P49759 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 PICART1-201ENST00000499842 2533 ntTSL 2 BASIC12.37□□□□□ -0.43
CLK1P49759 IFNAR2-205ENST00000404220 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 HACD3-201ENST00000261875 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.37□□□□□ -0.43
CLK1P49759 ABCD1P4-201ENST00000399687 604 ntBASIC12.37□□□□□ -0.43
CLK1P49759 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CLK1P49759 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC12.37□□□□□ -0.43
CLK1P49759 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CLK1P49759 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.37□□□□□ -0.43
CLK1P49759 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.37□□□□□ -0.43
CLK1P49759 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
CLK1P49759 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC12.37□□□□□ -0.43
CLK1P49759 AC025186.1-201ENST00000478174 870 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms