Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 RNA5SP84-201ENST00000364740 107 ntBASIC11.49□□□□□ -0.57
NPIPB4C9JG80 SURF4-203ENST00000371991 715 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 KRT18P33-201ENST00000398525 1043 ntBASIC11.49□□□□□ -0.57
NPIPB4C9JG80 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 DUX4L31-201ENST00000446466 1136 ntBASIC11.49□□□□□ -0.57
NPIPB4C9JG80 AL136084.1-201ENST00000449172 318 ntBASIC11.49□□□□□ -0.57
NPIPB4C9JG80 PGAM1P12-201ENST00000505622 748 ntBASIC11.49□□□□□ -0.57
NPIPB4C9JG80 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 MIR4722-201ENST00000578292 60 ntBASIC11.49□□□□□ -0.57
NPIPB4C9JG80 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 PARGP1-201ENST00000417555 2286 ntBASIC11.49□□□□□ -0.57
NPIPB4C9JG80 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 IMPDH1P8-201ENST00000413639 1525 ntBASIC11.49□□□□□ -0.57
NPIPB4C9JG80 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 NRDC-214ENST00000544028 3819 ntTSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 FAM131B-204ENST00000409578 4286 ntTSL 5 BASIC11.49□□□□□ -0.57
NPIPB4C9JG80 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 FAM90A11P-201ENST00000518378 2218 ntBASIC11.48□□□□□ -0.57
NPIPB4C9JG80 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 SAP18-208ENST00000621421 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 OR4X1-201ENST00000320048 918 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 MIR1301-201ENST00000408518 82 ntBASIC11.48□□□□□ -0.57
NPIPB4C9JG80 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 AC006328.1-201ENST00000437571 379 ntBASIC11.48□□□□□ -0.57
NPIPB4C9JG80 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 HNRNPA1P55-201ENST00000505935 955 ntBASIC11.48□□□□□ -0.57
NPIPB4C9JG80 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 TREHP1-201ENST00000531328 465 ntBASIC11.48□□□□□ -0.57
NPIPB4C9JG80 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 ETV2-207ENST00000619399 994 ntTSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 ANGEL1-205ENST00000557179 1427 ntTSL 2 BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NPIPB4C9JG80 CCT7P1-201ENST00000406551 1611 ntBASIC11.48□□□□□ -0.57
NPIPB4C9JG80 FAM156A-223ENST00000623782 1931 ntAPPRIS P2 TSL 3 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms