Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CLIC4Q9Y696 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CLIC4Q9Y696 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 AC092053.2-201ENST00000640557 1818 ntBASIC25.15■■□□□ 1.62
CLIC4Q9Y696 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 AL117332.1-201ENST00000622628 974 ntBASIC25.15■■□□□ 1.62
CLIC4Q9Y696 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.15■■□□□ 1.62
CLIC4Q9Y696 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CLIC4Q9Y696 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.62
CLIC4Q9Y696 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CLIC4Q9Y696 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CLIC4Q9Y696 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
CLIC4Q9Y696 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.14■■□□□ 1.61
CLIC4Q9Y696 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
CLIC4Q9Y696 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.14■■□□□ 1.61
CLIC4Q9Y696 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CLIC4Q9Y696 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.12■■□□□ 1.61
CLIC4Q9Y696 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.11■■□□□ 1.61
CLIC4Q9Y696 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.11■■□□□ 1.61
CLIC4Q9Y696 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLIC4Q9Y696 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLIC4Q9Y696 AC137767.1-201ENST00000602918 1920 ntBASIC25.1■■□□□ 1.61
CLIC4Q9Y696 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLIC4Q9Y696 AL499627.2-201ENST00000606283 725 ntBASIC25.1■■□□□ 1.61
CLIC4Q9Y696 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.1■■□□□ 1.61
CLIC4Q9Y696 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLIC4Q9Y696 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLIC4Q9Y696 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CLIC4Q9Y696 C11orf96-202ENST00000528572 1834 ntBASIC25.09■■□□□ 1.61
CLIC4Q9Y696 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CLIC4Q9Y696 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 AC006455.2-201ENST00000429931 906 ntBASIC25.08■■□□□ 1.61
CLIC4Q9Y696 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.08■■□□□ 1.61
CLIC4Q9Y696 TRIR-205ENST00000592273 783 ntTSL 3 BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CLIC4Q9Y696 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms