Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SCN10AQ9Y5Y9 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SCN10AQ9Y5Y9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.45■■□□□ 1.51
SCN10AQ9Y5Y9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
SCN10AQ9Y5Y9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.45■■□□□ 1.5
SCN10AQ9Y5Y9 SMUG1P1-201ENST00000590640 811 ntBASIC24.45■■□□□ 1.5
SCN10AQ9Y5Y9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SCN10AQ9Y5Y9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
SCN10AQ9Y5Y9 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 AC080038.1-201ENST00000611274 1154 ntBASIC24.43■■□□□ 1.5
SCN10AQ9Y5Y9 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 H19-210ENST00000439725 1929 ntTSL 2 BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 AC026185.1-201ENST00000445748 174 ntBASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 KRT19P1-201ENST00000405746 1186 ntBASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.42■■□□□ 1.5
SCN10AQ9Y5Y9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 AC004812.2-201ENST00000611079 2094 ntBASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.41■■□□□ 1.5
SCN10AQ9Y5Y9 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.4■■□□□ 1.5
SCN10AQ9Y5Y9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC24.39■■□□□ 1.5
SCN10AQ9Y5Y9 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
SCN10AQ9Y5Y9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.39■■□□□ 1.5
SCN10AQ9Y5Y9 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SCN10AQ9Y5Y9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCN10AQ9Y5Y9 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SCN10AQ9Y5Y9 LINC01124-201ENST00000409786 2117 ntBASIC24.38■■□□□ 1.49
SCN10AQ9Y5Y9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
SCN10AQ9Y5Y9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
SCN10AQ9Y5Y9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC24.38■■□□□ 1.49
SCN10AQ9Y5Y9 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 AC010141.3-201ENST00000456659 717 ntBASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SCN10AQ9Y5Y9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 BID-214ENST00000617586 542 ntTSL 5 BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.36■■□□□ 1.49
SCN10AQ9Y5Y9 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms