Protein–RNA interactions for Protein: Q9Y4Y9

LSM5, U6 snRNA-associated Sm-like protein LSm5, humanhuman

Known RBP Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5Q9Y4Y9 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 AC022413.1-201ENST00000624602 984 ntBASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 AC073130.3-201ENST00000624389 2278 ntBASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
LSM5Q9Y4Y9 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 AL353803.4-201ENST00000565882 1934 ntBASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
LSM5Q9Y4Y9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
LSM5Q9Y4Y9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LSM5Q9Y4Y9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.08■□□□□ 0.49
LSM5Q9Y4Y9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LSM5Q9Y4Y9 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM5Q9Y4Y9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LSM5Q9Y4Y9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LSM5Q9Y4Y9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.08■□□□□ 0.48
LSM5Q9Y4Y9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LSM5Q9Y4Y9 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 RPS2P7-201ENST00000447334 885 ntBASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.07■□□□□ 0.48
LSM5Q9Y4Y9 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 AC005229.4-201ENST00000610085 2198 ntBASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LSM5Q9Y4Y9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 AC010542.4-201ENST00000563151 1910 ntBASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LSM5Q9Y4Y9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSM5Q9Y4Y9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.03■□□□□ 0.48
LSM5Q9Y4Y9 AC087742.1-201ENST00000575880 1738 ntBASIC18.03■□□□□ 0.48
LSM5Q9Y4Y9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms