Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTPN22Q9Y2R2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTPN22Q9Y2R2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTPN22Q9Y2R2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTPN22Q9Y2R2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTPN22Q9Y2R2 SLC7A5P2-201ENST00000553010 536 ntBASIC25.36■■□□□ 1.65
PTPN22Q9Y2R2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.36■■□□□ 1.65
PTPN22Q9Y2R2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC25.36■■□□□ 1.65
PTPN22Q9Y2R2 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 AC069152.1-201ENST00000438030 544 ntBASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 ALDH1A3-203ENST00000557963 1670 ntBASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PTPN22Q9Y2R2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTPN22Q9Y2R2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC25.34■■□□□ 1.65
PTPN22Q9Y2R2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.34■■□□□ 1.65
PTPN22Q9Y2R2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTPN22Q9Y2R2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTPN22Q9Y2R2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC25.34■■□□□ 1.65
PTPN22Q9Y2R2 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC25.34■■□□□ 1.65
PTPN22Q9Y2R2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PTPN22Q9Y2R2 BX005040.4-201ENST00000637145 1518 ntBASIC25.33■■□□□ 1.65
PTPN22Q9Y2R2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PTPN22Q9Y2R2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC25.33■■□□□ 1.65
PTPN22Q9Y2R2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC25.33■■□□□ 1.65
PTPN22Q9Y2R2 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
PTPN22Q9Y2R2 MFSD11-216ENST00000590393 1141 ntBASIC25.33■■□□□ 1.65
PTPN22Q9Y2R2 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTPN22Q9Y2R2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTPN22Q9Y2R2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
PTPN22Q9Y2R2 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.31■■□□□ 1.64
PTPN22Q9Y2R2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PTPN22Q9Y2R2 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
PTPN22Q9Y2R2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC25.3■■□□□ 1.64
PTPN22Q9Y2R2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC25.3■■□□□ 1.64
PTPN22Q9Y2R2 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
PTPN22Q9Y2R2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
PTPN22Q9Y2R2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.3■■□□□ 1.64
PTPN22Q9Y2R2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 AC087239.1-201ENST00000622671 572 ntBASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.29■■□□□ 1.64
PTPN22Q9Y2R2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 SLC29A4P1-201ENST00000398760 971 ntBASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 AC231657.2-201ENST00000624556 255 ntBASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.28■■□□□ 1.64
PTPN22Q9Y2R2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PTPN22Q9Y2R2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms