Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 AC137761.2-201ENST00000561729 223 ntBASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 AC145350.3-201ENST00000569033 163 ntBASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 ESRRAP2-201ENST00000418437 1549 ntBASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NOTCH3Q9UM47 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 FP325331.1-202ENST00000623531 1380 ntBASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 AC004854.2-201ENST00000608450 1441 ntBASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 HLA-L-209ENST00000420110 1011 ntBASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 AC026185.1-201ENST00000445748 174 ntBASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 GXYLT1P5-201ENST00000614548 1189 ntBASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NOTCH3Q9UM47 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 LHPP-203ENST00000392757 840 ntTSL 3 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.85■□□□□ 0.29
NOTCH3Q9UM47 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 AC006015.1-201ENST00000429970 570 ntBASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 TPRG1LP1-201ENST00000598702 760 ntBASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NOTCH3Q9UM47 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NOTCH3Q9UM47 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NOTCH3Q9UM47 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.83■□□□□ 0.29
NOTCH3Q9UM47 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
NOTCH3Q9UM47 AC138932.3-201ENST00000567634 1902 ntBASIC16.83■□□□□ 0.29
NOTCH3Q9UM47 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
NOTCH3Q9UM47 ABHD17AP1-201ENST00000358206 933 ntBASIC16.83■□□□□ 0.28
NOTCH3Q9UM47 AL499627.2-201ENST00000606283 725 ntBASIC16.83■□□□□ 0.28
NOTCH3Q9UM47 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NOTCH3Q9UM47 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NOTCH3Q9UM47 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.83■□□□□ 0.28
NOTCH3Q9UM47 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC16.83■□□□□ 0.28
NOTCH3Q9UM47 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
NOTCH3Q9UM47 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NOTCH3Q9UM47 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms