Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.72■□□□□ 0.91
CTSFQ9UBX1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.72■□□□□ 0.91
CTSFQ9UBX1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 AC012414.1-201ENST00000556676 535 ntBASIC20.71■□□□□ 0.91
CTSFQ9UBX1 AL358852.1-201ENST00000623174 1268 ntBASIC20.71■□□□□ 0.91
CTSFQ9UBX1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSFQ9UBX1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.91
CTSFQ9UBX1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSFQ9UBX1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTSFQ9UBX1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSFQ9UBX1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.7■□□□□ 0.9
CTSFQ9UBX1 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSFQ9UBX1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 YBX1P1-201ENST00000445822 960 ntBASIC20.68■□□□□ 0.9
CTSFQ9UBX1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 AL354811.1-201ENST00000610286 706 ntBASIC20.68■□□□□ 0.9
CTSFQ9UBX1 AL031602.1-201ENST00000633169 911 ntBASIC20.68■□□□□ 0.9
CTSFQ9UBX1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSFQ9UBX1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 AC027612.3-201ENST00000413684 1047 ntBASIC20.67■□□□□ 0.9
CTSFQ9UBX1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CTSFQ9UBX1 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CTSFQ9UBX1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSFQ9UBX1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTSFQ9UBX1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSFQ9UBX1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CTSFQ9UBX1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.66■□□□□ 0.9
CTSFQ9UBX1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSFQ9UBX1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSFQ9UBX1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSFQ9UBX1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 AC105233.4-201ENST00000642045 216 ntBASIC20.65■□□□□ 0.9
CTSFQ9UBX1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CTSFQ9UBX1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms