Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRIT1Q9P2V4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LRIT1Q9P2V4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
LRIT1Q9P2V4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
LRIT1Q9P2V4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.34■■□□□ 1.01
LRIT1Q9P2V4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.33■■□□□ 1.01
LRIT1Q9P2V4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.33■■□□□ 1.01
LRIT1Q9P2V4 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.33■■□□□ 1.01
LRIT1Q9P2V4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRIT1Q9P2V4 NTF6G-201ENST00000591094 616 ntBASIC21.33■■□□□ 1.01
LRIT1Q9P2V4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LRIT1Q9P2V4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
LRIT1Q9P2V4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.33■■□□□ 1
LRIT1Q9P2V4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
LRIT1Q9P2V4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.33■■□□□ 1
LRIT1Q9P2V4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
LRIT1Q9P2V4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
LRIT1Q9P2V4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRIT1Q9P2V4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LRIT1Q9P2V4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.32■■□□□ 1
LRIT1Q9P2V4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.32■■□□□ 1
LRIT1Q9P2V4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.32■■□□□ 1
LRIT1Q9P2V4 AL137784.2-201ENST00000607332 1000 ntBASIC21.32■■□□□ 1
LRIT1Q9P2V4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.32■■□□□ 1
LRIT1Q9P2V4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
LRIT1Q9P2V4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRIT1Q9P2V4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRIT1Q9P2V4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRIT1Q9P2V4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LRIT1Q9P2V4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRIT1Q9P2V4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LRIT1Q9P2V4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.31■■□□□ 1
LRIT1Q9P2V4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.31■■□□□ 1
LRIT1Q9P2V4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.31■■□□□ 1
LRIT1Q9P2V4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.31■■□□□ 1
LRIT1Q9P2V4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.31■■□□□ 1
LRIT1Q9P2V4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.31■■□□□ 1
LRIT1Q9P2V4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRIT1Q9P2V4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LRIT1Q9P2V4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LRIT1Q9P2V4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRIT1Q9P2V4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
LRIT1Q9P2V4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRIT1Q9P2V4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
LRIT1Q9P2V4 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRIT1Q9P2V4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LRIT1Q9P2V4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.3■■□□□ 1
LRIT1Q9P2V4 AC087239.1-201ENST00000622671 572 ntBASIC21.3■■□□□ 1
LRIT1Q9P2V4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.3■■□□□ 1
LRIT1Q9P2V4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.3■■□□□ 1
LRIT1Q9P2V4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.3■■□□□ 1
LRIT1Q9P2V4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRIT1Q9P2V4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LRIT1Q9P2V4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
LRIT1Q9P2V4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.3■■□□□ 1
LRIT1Q9P2V4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.29■■□□□ 1
LRIT1Q9P2V4 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.29■■□□□ 1
LRIT1Q9P2V4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.29■■□□□ 1
LRIT1Q9P2V4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.29■■□□□ 1
LRIT1Q9P2V4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.29■■□□□ 1
LRIT1Q9P2V4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.29■■□□□ 1
LRIT1Q9P2V4 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.29■■□□□ 1
LRIT1Q9P2V4 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
LRIT1Q9P2V4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.29■■□□□ 1
LRIT1Q9P2V4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRIT1Q9P2V4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.28■■□□□ 1
LRIT1Q9P2V4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRIT1Q9P2V4 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRIT1Q9P2V4 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.28■■□□□ 1
LRIT1Q9P2V4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LRIT1Q9P2V4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.28■■□□□ 1
LRIT1Q9P2V4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.28■■□□□ 1
LRIT1Q9P2V4 RARRES2P11-201ENST00000635158 484 ntBASIC21.28■■□□□ 1
LRIT1Q9P2V4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LRIT1Q9P2V4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LRIT1Q9P2V4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.27■■□□□ 1
LRIT1Q9P2V4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LRIT1Q9P2V4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRIT1Q9P2V4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRIT1Q9P2V4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRIT1Q9P2V4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRIT1Q9P2V4 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRIT1Q9P2V4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LRIT1Q9P2V4 AC010141.3-201ENST00000456659 717 ntBASIC21.27■■□□□ 1
LRIT1Q9P2V4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.27■■□□□ 1
LRIT1Q9P2V4 AC092437.1-201ENST00000624794 1048 ntBASIC21.27■■□□□ 1
LRIT1Q9P2V4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LRIT1Q9P2V4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LRIT1Q9P2V4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.27■■□□□ 1
LRIT1Q9P2V4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms