Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
THUMPD1Q9NXG2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 AC139530.1-201ENST00000575312 1977 ntBASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
THUMPD1Q9NXG2 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 AC092053.2-201ENST00000640557 1818 ntBASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.62■□□□□ 0.89
THUMPD1Q9NXG2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
THUMPD1Q9NXG2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 C11orf96-202ENST00000528572 1834 ntBASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 AC010997.5-201ENST00000609182 354 ntBASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 AC087742.1-201ENST00000575880 1738 ntBASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 PKD1P6-201ENST00000343738 4769 ntBASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 AC009102.2-201ENST00000606772 1639 ntBASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
THUMPD1Q9NXG2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
THUMPD1Q9NXG2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
THUMPD1Q9NXG2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
THUMPD1Q9NXG2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
THUMPD1Q9NXG2 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.58■□□□□ 0.89
THUMPD1Q9NXG2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
THUMPD1Q9NXG2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
THUMPD1Q9NXG2 AL137060.1-201ENST00000618151 2648 ntBASIC20.58■□□□□ 0.89
THUMPD1Q9NXG2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
THUMPD1Q9NXG2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 AC239859.2-201ENST00000444165 318 ntBASIC20.57■□□□□ 0.88
THUMPD1Q9NXG2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms