Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RLIMQ9NVW2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.47■□□□□ 0.87
RLIMQ9NVW2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RLIMQ9NVW2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
RLIMQ9NVW2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RLIMQ9NVW2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RLIMQ9NVW2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.47■□□□□ 0.87
RLIMQ9NVW2 AC080038.3-201ENST00000623346 1952 ntBASIC20.46■□□□□ 0.87
RLIMQ9NVW2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RLIMQ9NVW2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RLIMQ9NVW2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RLIMQ9NVW2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RLIMQ9NVW2 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.46■□□□□ 0.87
RLIMQ9NVW2 AL035685.1-201ENST00000636663 812 ntBASIC20.46■□□□□ 0.87
RLIMQ9NVW2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RLIMQ9NVW2 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RLIMQ9NVW2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RLIMQ9NVW2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.46■□□□□ 0.87
RLIMQ9NVW2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 FP325331.1-202ENST00000623531 1380 ntBASIC20.45■□□□□ 0.86
RLIMQ9NVW2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
RLIMQ9NVW2 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
RLIMQ9NVW2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
RLIMQ9NVW2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RLIMQ9NVW2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RLIMQ9NVW2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.43■□□□□ 0.86
RLIMQ9NVW2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RLIMQ9NVW2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
RLIMQ9NVW2 C11orf96-202ENST00000528572 1834 ntBASIC20.43■□□□□ 0.86
RLIMQ9NVW2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
RLIMQ9NVW2 AC092053.2-201ENST00000640557 1818 ntBASIC20.43■□□□□ 0.86
RLIMQ9NVW2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RLIMQ9NVW2 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.42■□□□□ 0.86
RLIMQ9NVW2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RLIMQ9NVW2 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
RLIMQ9NVW2 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.42■□□□□ 0.86
RLIMQ9NVW2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RLIMQ9NVW2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
RLIMQ9NVW2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
RLIMQ9NVW2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.41■□□□□ 0.86
RLIMQ9NVW2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
RLIMQ9NVW2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
RLIMQ9NVW2 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RLIMQ9NVW2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.41■□□□□ 0.86
RLIMQ9NVW2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
RLIMQ9NVW2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.41■□□□□ 0.86
RLIMQ9NVW2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
RLIMQ9NVW2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RLIMQ9NVW2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
RLIMQ9NVW2 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
RLIMQ9NVW2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
RLIMQ9NVW2 AC087742.1-201ENST00000575880 1738 ntBASIC20.39■□□□□ 0.86
RLIMQ9NVW2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.39■□□□□ 0.86
RLIMQ9NVW2 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 MIR6724-1-201ENST00000616420 92 ntBASIC20.39■□□□□ 0.85
RLIMQ9NVW2 MIR6724-2-201ENST00000616483 92 ntBASIC20.39■□□□□ 0.85
RLIMQ9NVW2 MIR6724-4-201ENST00000617390 92 ntBASIC20.39■□□□□ 0.85
RLIMQ9NVW2 MIR6724-3-201ENST00000622482 92 ntBASIC20.39■□□□□ 0.85
RLIMQ9NVW2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RLIMQ9NVW2 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
RLIMQ9NVW2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms