Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 KRT125P-201ENST00000546827 989 ntBASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 AC087393.1-201ENST00000582896 145 ntBASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.87■□□□□ 0.93
CCM2LQ9NUG4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2LQ9NUG4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCM2LQ9NUG4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 MIR638-201ENST00000385237 100 ntBASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 MIR4787-201ENST00000607364 84 ntBASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.84■□□□□ 0.93
CCM2LQ9NUG4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
CCM2LQ9NUG4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCM2LQ9NUG4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCM2LQ9NUG4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCM2LQ9NUG4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCM2LQ9NUG4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 FAM99A-202ENST00000538190 1989 ntBASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CCM2LQ9NUG4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2LQ9NUG4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2LQ9NUG4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2LQ9NUG4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2LQ9NUG4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2LQ9NUG4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CCM2LQ9NUG4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.81■□□□□ 0.92
CCM2LQ9NUG4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCM2LQ9NUG4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCM2LQ9NUG4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 BX664725.1-201ENST00000438252 379 ntBASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 AC010542.4-201ENST00000563151 1910 ntBASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCM2LQ9NUG4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 KRT16P3-201ENST00000439127 1283 ntBASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 LONRF2P2-201ENST00000439212 571 ntBASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCM2LQ9NUG4 AC011551.1-201ENST00000614101 683 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms