Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 AL137060.1-201ENST00000618151 2648 ntBASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 YBX1P4-201ENST00000392794 808 ntBASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 AC103724.3-201ENST00000564481 992 ntBASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 AC009086.3-201ENST00000623486 1008 ntBASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC15.12■□□□□ 0.01
CDC42SE2Q9NRR3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CDC42SE2Q9NRR3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 DUX4L4-201ENST00000566884 1269 ntBASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CDC42SE2Q9NRR3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 AC012354.3-201ENST00000623734 483 ntBASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CDC42SE2Q9NRR3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CDC42SE2Q9NRR3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CDC42SE2Q9NRR3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CDC42SE2Q9NRR3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC15.08■□□□□ 0.01
CDC42SE2Q9NRR3 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.08■□□□□ 0.01
CDC42SE2Q9NRR3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 KRT8P33-201ENST00000508125 1423 ntBASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CDC42SE2Q9NRR3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDC42SE2Q9NRR3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42SE2Q9NRR3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.07■□□□□ 0
CDC42SE2Q9NRR3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42SE2Q9NRR3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.07■□□□□ 0
CDC42SE2Q9NRR3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDC42SE2Q9NRR3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDC42SE2Q9NRR3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms