Protein–RNA interactions for Protein: Q9HBV1

POPDC3, Popeye domain-containing protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POPDC3Q9HBV1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 AL356740.2-201ENST00000601559 647 ntBASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 C11orf96-202ENST00000528572 1834 ntBASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
POPDC3Q9HBV1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
POPDC3Q9HBV1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
POPDC3Q9HBV1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 MIR3621-201ENST00000580529 85 ntBASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
POPDC3Q9HBV1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.63■■□□□ 1.05
POPDC3Q9HBV1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
POPDC3Q9HBV1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
POPDC3Q9HBV1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
POPDC3Q9HBV1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
POPDC3Q9HBV1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.63■■□□□ 1.05
POPDC3Q9HBV1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
POPDC3Q9HBV1 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.63■■□□□ 1.05
POPDC3Q9HBV1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
POPDC3Q9HBV1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.61■■□□□ 1.05
POPDC3Q9HBV1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.6■■□□□ 1.05
POPDC3Q9HBV1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
POPDC3Q9HBV1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
POPDC3Q9HBV1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POPDC3Q9HBV1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.6■■□□□ 1.05
POPDC3Q9HBV1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
POPDC3Q9HBV1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POPDC3Q9HBV1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
POPDC3Q9HBV1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
POPDC3Q9HBV1 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POPDC3Q9HBV1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POPDC3Q9HBV1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POPDC3Q9HBV1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
POPDC3Q9HBV1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
POPDC3Q9HBV1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
POPDC3Q9HBV1 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms