Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 AC012414.1-201ENST00000556676 535 ntBASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 AC092437.1-201ENST00000624794 1048 ntBASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC7.5□□□□□ -1.21
KRTAP4-3Q9BYR4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 MIR572-201ENST00000384983 95 ntBASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 PARL-206ENST00000435888 1098 ntTSL 5 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 OR2I1P-207ENST00000453522 948 ntBASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 CCDC92B-201ENST00000575506 885 ntBASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 AC022517.1-201ENST00000592429 346 ntBASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
KRTAP4-3Q9BYR4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 NT5C3AP1-201ENST00000394500 1012 ntBASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 YBX1P1-201ENST00000445822 960 ntBASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
KRTAP4-3Q9BYR4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms