Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
RPAP1Q9BWH6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
RPAP1Q9BWH6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
RPAP1Q9BWH6 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
RPAP1Q9BWH6 AC027612.3-201ENST00000413684 1047 ntBASIC26.78■■□□□ 1.88
RPAP1Q9BWH6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.78■■□□□ 1.88
RPAP1Q9BWH6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
RPAP1Q9BWH6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 IGHV3-19-201ENST00000521488 291 ntBASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 DUX4L4-201ENST00000566884 1269 ntBASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 AL031602.1-201ENST00000633169 911 ntBASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 TSPY26P-201ENST00000476365 1326 ntBASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
RPAP1Q9BWH6 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.88
RPAP1Q9BWH6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
RPAP1Q9BWH6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.76■■□□□ 1.87
RPAP1Q9BWH6 AC079834.2-201ENST00000609776 1949 ntBASIC26.75■■□□□ 1.87
RPAP1Q9BWH6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RPAP1Q9BWH6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.75■■□□□ 1.87
RPAP1Q9BWH6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.75■■□□□ 1.87
RPAP1Q9BWH6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
RPAP1Q9BWH6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
RPAP1Q9BWH6 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC26.75■■□□□ 1.87
RPAP1Q9BWH6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
RPAP1Q9BWH6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.73■■□□□ 1.87
RPAP1Q9BWH6 AL358852.1-201ENST00000623174 1268 ntBASIC26.73■■□□□ 1.87
RPAP1Q9BWH6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.73■■□□□ 1.87
RPAP1Q9BWH6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.73■■□□□ 1.87
RPAP1Q9BWH6 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
RPAP1Q9BWH6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.73■■□□□ 1.87
RPAP1Q9BWH6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
RPAP1Q9BWH6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RPAP1Q9BWH6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RPAP1Q9BWH6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RPAP1Q9BWH6 LINC01529-204ENST00000636474 1715 ntBASIC26.72■■□□□ 1.87
RPAP1Q9BWH6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
RPAP1Q9BWH6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.72■■□□□ 1.87
RPAP1Q9BWH6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.72■■□□□ 1.87
RPAP1Q9BWH6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
RPAP1Q9BWH6 KRT18P5-201ENST00000436075 1291 ntBASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 DUX4L2-201ENST00000561772 1275 ntBASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 DUX4L6-201ENST00000626483 1275 ntBASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 DUX4L1-201ENST00000627662 1275 ntBASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 DUX4L8-201ENST00000629013 1275 ntBASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 DUX4L3-201ENST00000630187 1275 ntBASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 DUX4L7-201ENST00000630678 1275 ntBASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 DUX4L5-201ENST00000630834 1275 ntBASIC26.71■■□□□ 1.87
RPAP1Q9BWH6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.7■■□□□ 1.87
RPAP1Q9BWH6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
RPAP1Q9BWH6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
RPAP1Q9BWH6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 MIR572-201ENST00000384983 95 ntBASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 AC012414.1-201ENST00000556676 535 ntBASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.7■■□□□ 1.86
RPAP1Q9BWH6 AL499627.2-201ENST00000606283 725 ntBASIC26.7■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms