Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HIST1H2AJQ99878 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.52■■□□□ 1.04
HIST1H2AJQ99878 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIST1H2AJQ99878 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIST1H2AJQ99878 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.52■■□□□ 1.04
HIST1H2AJQ99878 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
HIST1H2AJQ99878 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HIST1H2AJQ99878 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
HIST1H2AJQ99878 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
HIST1H2AJQ99878 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 AC131212.1-201ENST00000613771 668 ntBASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
HIST1H2AJQ99878 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 AC006455.2-201ENST00000429931 906 ntBASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 DUX4L19-201ENST00000557448 1267 ntBASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 AL117328.2-201ENST00000624617 1940 ntBASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIST1H2AJQ99878 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 AC131281.2-201ENST00000520478 145 ntBASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 MIR4466-201ENST00000606121 54 ntBASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIST1H2AJQ99878 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 LINC01960-201ENST00000563759 1884 ntBASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 AC133637.1-201ENST00000624115 1537 ntBASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HIST1H2AJQ99878 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 GUSBP5-202ENST00000510805 1989 ntBASIC21.47■■□□□ 1.03
HIST1H2AJQ99878 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 SYT6-210ENST00000641643 1587 ntBASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
HIST1H2AJQ99878 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms