Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.25■□□□□ 0.83
TM9SF2Q99805 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TM9SF2Q99805 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TM9SF2Q99805 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TM9SF2Q99805 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.25■□□□□ 0.83
TM9SF2Q99805 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 AC009102.2-201ENST00000606772 1639 ntBASIC20.24■□□□□ 0.83
TM9SF2Q99805 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.24■□□□□ 0.83
TM9SF2Q99805 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.24■□□□□ 0.83
TM9SF2Q99805 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.24■□□□□ 0.83
TM9SF2Q99805 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.24■□□□□ 0.83
TM9SF2Q99805 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TM9SF2Q99805 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TM9SF2Q99805 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TM9SF2Q99805 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF2Q99805 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
TM9SF2Q99805 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF2Q99805 ALDH1A3-203ENST00000557963 1670 ntBASIC20.23■□□□□ 0.83
TM9SF2Q99805 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TM9SF2Q99805 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF2Q99805 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF2Q99805 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.23■□□□□ 0.83
TM9SF2Q99805 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TM9SF2Q99805 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF2Q99805 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.23■□□□□ 0.83
TM9SF2Q99805 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.23■□□□□ 0.83
TM9SF2Q99805 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF2Q99805 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.23■□□□□ 0.83
TM9SF2Q99805 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF2Q99805 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TM9SF2Q99805 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.23■□□□□ 0.83
TM9SF2Q99805 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TM9SF2Q99805 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF2Q99805 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.22■□□□□ 0.83
TM9SF2Q99805 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF2Q99805 SYT6-210ENST00000641643 1587 ntBASIC20.22■□□□□ 0.83
TM9SF2Q99805 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
TM9SF2Q99805 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.22■□□□□ 0.83
TM9SF2Q99805 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF2Q99805 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF2Q99805 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.22■□□□□ 0.83
TM9SF2Q99805 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.22■□□□□ 0.83
TM9SF2Q99805 AC241377.3-202ENST00000626088 1088 ntBASIC20.22■□□□□ 0.83
TM9SF2Q99805 AC241585.3-202ENST00000628937 1088 ntBASIC20.22■□□□□ 0.83
TM9SF2Q99805 AC245100.8-202ENST00000629247 1058 ntBASIC20.22■□□□□ 0.83
TM9SF2Q99805 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.22■□□□□ 0.83
TM9SF2Q99805 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF2Q99805 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF2Q99805 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TM9SF2Q99805 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
TM9SF2Q99805 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF2Q99805 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.21■□□□□ 0.83
TM9SF2Q99805 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF2Q99805 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF2Q99805 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.21■□□□□ 0.83
TM9SF2Q99805 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.21■□□□□ 0.83
TM9SF2Q99805 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
TM9SF2Q99805 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.21■□□□□ 0.83
TM9SF2Q99805 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TM9SF2Q99805 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.2■□□□□ 0.83
TM9SF2Q99805 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.2■□□□□ 0.82
TM9SF2Q99805 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 EDA-201ENST00000338901 1233 ntBASIC20.2■□□□□ 0.82
TM9SF2Q99805 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
TM9SF2Q99805 AC024257.2-201ENST00000549699 147 ntBASIC20.2■□□□□ 0.82
TM9SF2Q99805 C17orf82-201ENST00000623772 1530 ntBASIC20.2■□□□□ 0.82
TM9SF2Q99805 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TM9SF2Q99805 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.2■□□□□ 0.82
TM9SF2Q99805 AC127496.7-201ENST00000625110 1798 ntBASIC20.2■□□□□ 0.82
TM9SF2Q99805 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 AC007375.3-201ENST00000600936 2314 ntBASIC20.2■□□□□ 0.82
TM9SF2Q99805 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TM9SF2Q99805 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.2■□□□□ 0.82
TM9SF2Q99805 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TM9SF2Q99805 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TM9SF2Q99805 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.19■□□□□ 0.82
TM9SF2Q99805 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms