Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.14■□□□□ 0.33
TRGV9Q99603 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.14■□□□□ 0.33
TRGV9Q99603 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRGV9Q99603 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV9Q99603 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV9Q99603 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.13■□□□□ 0.33
TRGV9Q99603 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
TRGV9Q99603 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.13■□□□□ 0.33
TRGV9Q99603 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV9Q99603 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.13■□□□□ 0.33
TRGV9Q99603 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRGV9Q99603 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV9Q99603 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRGV9Q99603 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV9Q99603 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV9Q99603 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRGV9Q99603 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV9Q99603 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV9Q99603 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV9Q99603 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV9Q99603 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV9Q99603 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV9Q99603 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV9Q99603 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV9Q99603 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.12■□□□□ 0.33
TRGV9Q99603 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRGV9Q99603 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV9Q99603 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV9Q99603 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.12■□□□□ 0.33
TRGV9Q99603 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV9Q99603 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRGV9Q99603 AC007375.3-201ENST00000600936 2314 ntBASIC17.12■□□□□ 0.33
TRGV9Q99603 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRGV9Q99603 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV9Q99603 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.11■□□□□ 0.33
TRGV9Q99603 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV9Q99603 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRGV9Q99603 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV9Q99603 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV9Q99603 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.11■□□□□ 0.33
TRGV9Q99603 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV9Q99603 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV9Q99603 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV9Q99603 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.11■□□□□ 0.33
TRGV9Q99603 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.11■□□□□ 0.33
TRGV9Q99603 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV9Q99603 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRGV9Q99603 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRGV9Q99603 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRGV9Q99603 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.1■□□□□ 0.33
TRGV9Q99603 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.1■□□□□ 0.33
TRGV9Q99603 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.1■□□□□ 0.33
TRGV9Q99603 FBXW4P1-201ENST00000426721 2239 ntBASIC17.1■□□□□ 0.33
TRGV9Q99603 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRGV9Q99603 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRGV9Q99603 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.1■□□□□ 0.33
TRGV9Q99603 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.1■□□□□ 0.33
TRGV9Q99603 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRGV9Q99603 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV9Q99603 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.09■□□□□ 0.33
TRGV9Q99603 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.09■□□□□ 0.33
TRGV9Q99603 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV9Q99603 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV9Q99603 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.09■□□□□ 0.33
TRGV9Q99603 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRGV9Q99603 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV9Q99603 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.09■□□□□ 0.33
TRGV9Q99603 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.09■□□□□ 0.33
TRGV9Q99603 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRGV9Q99603 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
TRGV9Q99603 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV9Q99603 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
TRGV9Q99603 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV9Q99603 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRGV9Q99603 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.08■□□□□ 0.33
TRGV9Q99603 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.08■□□□□ 0.33
TRGV9Q99603 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.08■□□□□ 0.33
TRGV9Q99603 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TRGV9Q99603 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV9Q99603 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV9Q99603 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRGV9Q99603 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms