Protein–RNA interactions for Protein: Q8WWA1

TMEM40, Transmembrane protein 40, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40Q8WWA1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 KRT18P61-201ENST00000585825 1298 ntBASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 RARRES2P11-201ENST00000635158 484 ntBASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TMEM40Q8WWA1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TMEM40Q8WWA1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TMEM40Q8WWA1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
TMEM40Q8WWA1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TMEM40Q8WWA1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.11■■□□□ 1.45
TMEM40Q8WWA1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TMEM40Q8WWA1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.11■■□□□ 1.45
TMEM40Q8WWA1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 TPRG1LP1-201ENST00000598702 760 ntBASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TMEM40Q8WWA1 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
TMEM40Q8WWA1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
TMEM40Q8WWA1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMEM40Q8WWA1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.09■■□□□ 1.45
TMEM40Q8WWA1 AC090192.1-201ENST00000517740 490 ntBASIC24.09■■□□□ 1.45
TMEM40Q8WWA1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TMEM40Q8WWA1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TMEM40Q8WWA1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.09■■□□□ 1.45
TMEM40Q8WWA1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TMEM40Q8WWA1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TMEM40Q8WWA1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMEM40Q8WWA1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMEM40Q8WWA1 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMEM40Q8WWA1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
TMEM40Q8WWA1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TMEM40Q8WWA1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMEM40Q8WWA1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
TMEM40Q8WWA1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 AC068587.7-201ENST00000641602 218 ntBASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TMEM40Q8WWA1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.06■■□□□ 1.44
TMEM40Q8WWA1 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEM40Q8WWA1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.06■■□□□ 1.44
TMEM40Q8WWA1 AC004911.1-201ENST00000416316 871 ntBASIC24.06■■□□□ 1.44
TMEM40Q8WWA1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.06■■□□□ 1.44
TMEM40Q8WWA1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TMEM40Q8WWA1 ANOS2P-203ENST00000472227 1816 ntBASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 SMUG1P1-201ENST00000590640 811 ntBASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TMEM40Q8WWA1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 AC010141.3-201ENST00000456659 717 ntBASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TMEM40Q8WWA1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.03■■□□□ 1.44
TMEM40Q8WWA1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.03■■□□□ 1.44
TMEM40Q8WWA1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TMEM40Q8WWA1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TMEM40Q8WWA1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.03■■□□□ 1.44
TMEM40Q8WWA1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms