Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.81■□□□□ 0.92
SNIP1Q8TAD8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SNIP1Q8TAD8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 AC083906.2-201ENST00000511578 360 ntBASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 MFSD11-216ENST00000590393 1141 ntBASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 AL050303.2-201ENST00000619798 666 ntBASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SNIP1Q8TAD8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 GUSBP6-202ENST00000438529 1198 ntBASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SNIP1Q8TAD8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.77■□□□□ 0.92
SNIP1Q8TAD8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNIP1Q8TAD8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SNIP1Q8TAD8 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 LINC01529-204ENST00000636474 1715 ntBASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 FAM201B-201ENST00000458407 597 ntBASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 AC093827.2-201ENST00000512654 315 ntBASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 SLC7A5P2-201ENST00000553010 536 ntBASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 AC231657.2-201ENST00000624556 255 ntBASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.76■□□□□ 0.91
SNIP1Q8TAD8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 MIR4651-201ENST00000582622 73 ntBASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.75■□□□□ 0.91
SNIP1Q8TAD8 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNIP1Q8TAD8 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms