Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 ECEL1P1-201ENST00000373592 1742 ntBASIC20.56■□□□□ 0.88
NUP43Q8NFH3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NUP43Q8NFH3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NUP43Q8NFH3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 LINC00526-201ENST00000581067 1875 ntBASIC20.54■□□□□ 0.88
NUP43Q8NFH3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
NUP43Q8NFH3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 AC133637.1-201ENST00000624115 1537 ntBASIC20.53■□□□□ 0.88
NUP43Q8NFH3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUP43Q8NFH3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 MIR4466-201ENST00000606121 54 ntBASIC20.52■□□□□ 0.88
NUP43Q8NFH3 AC092171.4-201ENST00000609130 632 ntBASIC20.52■□□□□ 0.88
NUP43Q8NFH3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.52■□□□□ 0.88
NUP43Q8NFH3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUP43Q8NFH3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 AC080038.3-201ENST00000623346 1952 ntBASIC20.51■□□□□ 0.87
NUP43Q8NFH3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUP43Q8NFH3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
NUP43Q8NFH3 AC131281.2-201ENST00000520478 145 ntBASIC20.5■□□□□ 0.87
NUP43Q8NFH3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms