Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC34.85■■■■□ 3.17
CFAP43Q8NDM7 H19-210ENST00000439725 1929 ntTSL 2 BASIC34.85■■■■□ 3.17
CFAP43Q8NDM7 FP325331.1-202ENST00000623531 1380 ntBASIC34.85■■■■□ 3.17
CFAP43Q8NDM7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CFAP43Q8NDM7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CFAP43Q8NDM7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC34.84■■■■□ 3.17
CFAP43Q8NDM7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC34.84■■■■□ 3.17
CFAP43Q8NDM7 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CFAP43Q8NDM7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CFAP43Q8NDM7 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CFAP43Q8NDM7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CFAP43Q8NDM7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC34.83■■■■□ 3.17
CFAP43Q8NDM7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CFAP43Q8NDM7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC34.83■■■■□ 3.17
CFAP43Q8NDM7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC34.83■■■■□ 3.17
CFAP43Q8NDM7 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC34.83■■■■□ 3.17
CFAP43Q8NDM7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC34.82■■■■□ 3.17
CFAP43Q8NDM7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.17
CFAP43Q8NDM7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC34.82■■■■□ 3.17
CFAP43Q8NDM7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC34.82■■■■□ 3.17
CFAP43Q8NDM7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC34.82■■■■□ 3.17
CFAP43Q8NDM7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
CFAP43Q8NDM7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CFAP43Q8NDM7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC34.82■■■■□ 3.16
CFAP43Q8NDM7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC34.82■■■■□ 3.16
CFAP43Q8NDM7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC34.82■■■■□ 3.16
CFAP43Q8NDM7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC34.82■■■■□ 3.16
CFAP43Q8NDM7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC34.82■■■■□ 3.16
CFAP43Q8NDM7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC34.81■■■■□ 3.16
CFAP43Q8NDM7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
CFAP43Q8NDM7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC34.81■■■■□ 3.16
CFAP43Q8NDM7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC34.8■■■■□ 3.16
CFAP43Q8NDM7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
CFAP43Q8NDM7 ABCB10P4-201ENST00000566803 2184 ntBASIC34.8■■■■□ 3.16
CFAP43Q8NDM7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CFAP43Q8NDM7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CFAP43Q8NDM7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CFAP43Q8NDM7 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC34.79■■■■□ 3.16
CFAP43Q8NDM7 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CFAP43Q8NDM7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC34.79■■■■□ 3.16
CFAP43Q8NDM7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC34.79■■■■□ 3.16
CFAP43Q8NDM7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC34.79■■■■□ 3.16
CFAP43Q8NDM7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC34.79■■■■□ 3.16
CFAP43Q8NDM7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC34.78■■■■□ 3.16
CFAP43Q8NDM7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CFAP43Q8NDM7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC34.78■■■■□ 3.16
CFAP43Q8NDM7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC34.78■■■■□ 3.16
CFAP43Q8NDM7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC34.78■■■■□ 3.16
CFAP43Q8NDM7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC34.78■■■■□ 3.16
CFAP43Q8NDM7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 GAMT-205ENST00000640762 751 ntTSL 5 BASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 AP004607.4-201ENST00000530158 1459 ntBASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFAP43Q8NDM7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 APTR-205ENST00000447009 902 ntTSL 2 BASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 CD99P1-205ENST00000527459 561 ntBASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 AC105233.4-201ENST00000642045 216 ntBASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CFAP43Q8NDM7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC34.76■■■■□ 3.15
CFAP43Q8NDM7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC34.76■■■■□ 3.15
CFAP43Q8NDM7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC34.76■■■■□ 3.15
CFAP43Q8NDM7 AC142086.2-201ENST00000569753 217 ntBASIC34.76■■■■□ 3.15
CFAP43Q8NDM7 AC004854.2-201ENST00000608450 1441 ntBASIC34.75■■■■□ 3.15
CFAP43Q8NDM7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CFAP43Q8NDM7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CFAP43Q8NDM7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC34.74■■■■□ 3.15
CFAP43Q8NDM7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CFAP43Q8NDM7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CFAP43Q8NDM7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
CFAP43Q8NDM7 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC34.74■■■■□ 3.15
CFAP43Q8NDM7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC34.74■■■■□ 3.15
CFAP43Q8NDM7 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
CFAP43Q8NDM7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC34.73■■■■□ 3.15
CFAP43Q8NDM7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC34.73■■■■□ 3.15
CFAP43Q8NDM7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC34.73■■■■□ 3.15
CFAP43Q8NDM7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC34.73■■■■□ 3.15
CFAP43Q8NDM7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC34.73■■■■□ 3.15
CFAP43Q8NDM7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC34.73■■■■□ 3.15
CFAP43Q8NDM7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CFAP43Q8NDM7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CFAP43Q8NDM7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CFAP43Q8NDM7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CFAP43Q8NDM7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC34.72■■■■□ 3.15
CFAP43Q8NDM7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CFAP43Q8NDM7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC34.72■■■■□ 3.15
CFAP43Q8NDM7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC34.72■■■■□ 3.15
CFAP43Q8NDM7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CFAP43Q8NDM7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC34.72■■■■□ 3.15
CFAP43Q8NDM7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC34.72■■■■□ 3.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms