Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
SMRP1Q8NCR6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
SMRP1Q8NCR6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 AC145676.1-201ENST00000514988 2004 ntBASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
SMRP1Q8NCR6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 AL138781.1-201ENST00000566567 1274 ntBASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
SMRP1Q8NCR6 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
SMRP1Q8NCR6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23■■□□□ 1.27
SMRP1Q8NCR6 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23■■□□□ 1.27
SMRP1Q8NCR6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23■■□□□ 1.27
SMRP1Q8NCR6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23■■□□□ 1.27
SMRP1Q8NCR6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
SMRP1Q8NCR6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23■■□□□ 1.27
SMRP1Q8NCR6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23■■□□□ 1.27
SMRP1Q8NCR6 AC135731.1-201ENST00000569415 2548 ntBASIC23■■□□□ 1.27
SMRP1Q8NCR6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 DUX4L16-201ENST00000555130 1264 ntBASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 AC005181.1-201ENST00000604782 1256 ntBASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
SMRP1Q8NCR6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMRP1Q8NCR6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMRP1Q8NCR6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMRP1Q8NCR6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.98■■□□□ 1.27
SMRP1Q8NCR6 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
SMRP1Q8NCR6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
SMRP1Q8NCR6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.98■■□□□ 1.27
SMRP1Q8NCR6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 AC007322.1-201ENST00000426983 750 ntBASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 AC069152.1-201ENST00000438030 544 ntBASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 AC010141.3-201ENST00000456659 717 ntBASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 FAM201B-201ENST00000458407 597 ntBASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 AC087239.1-201ENST00000622671 572 ntBASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
SMRP1Q8NCR6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 SLC29A4P1-201ENST00000398760 971 ntBASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 AC093827.2-201ENST00000512654 315 ntBASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.96■■□□□ 1.27
SMRP1Q8NCR6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.95■■□□□ 1.26
SMRP1Q8NCR6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
SMRP1Q8NCR6 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms