Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
TRIML1Q8N9V2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.51■■□□□ 1.51
TRIML1Q8N9V2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC24.5■■□□□ 1.51
TRIML1Q8N9V2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIML1Q8N9V2 MTDHP2-201ENST00000601468 714 ntBASIC24.5■■□□□ 1.51
TRIML1Q8N9V2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIML1Q8N9V2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIML1Q8N9V2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
TRIML1Q8N9V2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
TRIML1Q8N9V2 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
TRIML1Q8N9V2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 CD72-202ENST00000378430 585 ntTSL 3 BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 CA15P2-201ENST00000611168 834 ntBASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 C17orf82-201ENST00000623772 1530 ntBASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC24.48■■□□□ 1.51
TRIML1Q8N9V2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
TRIML1Q8N9V2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIML1Q8N9V2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRIML1Q8N9V2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC24.46■■□□□ 1.51
TRIML1Q8N9V2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIML1Q8N9V2 MIR4787-201ENST00000607364 84 ntBASIC24.46■■□□□ 1.51
TRIML1Q8N9V2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
TRIML1Q8N9V2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
TRIML1Q8N9V2 AC004687.1-201ENST00000579003 1625 ntBASIC24.46■■□□□ 1.51
TRIML1Q8N9V2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.45■■□□□ 1.51
TRIML1Q8N9V2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
TRIML1Q8N9V2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.51
TRIML1Q8N9V2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.45■■□□□ 1.5
TRIML1Q8N9V2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.45■■□□□ 1.5
TRIML1Q8N9V2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.45■■□□□ 1.5
TRIML1Q8N9V2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC24.45■■□□□ 1.5
TRIML1Q8N9V2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
TRIML1Q8N9V2 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
TRIML1Q8N9V2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
TRIML1Q8N9V2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 AC007375.3-201ENST00000600936 2314 ntBASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 AC131212.1-201ENST00000613771 668 ntBASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC24.44■■□□□ 1.5
TRIML1Q8N9V2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIML1Q8N9V2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIML1Q8N9V2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
TRIML1Q8N9V2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.43■■□□□ 1.5
TRIML1Q8N9V2 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.43■■□□□ 1.5
TRIML1Q8N9V2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TRIML1Q8N9V2 AC010997.5-201ENST00000609182 354 ntBASIC24.43■■□□□ 1.5
TRIML1Q8N9V2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC24.43■■□□□ 1.5
TRIML1Q8N9V2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
TRIML1Q8N9V2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIML1Q8N9V2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
TRIML1Q8N9V2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
TRIML1Q8N9V2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.42■■□□□ 1.5
TRIML1Q8N9V2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.42■■□□□ 1.5
TRIML1Q8N9V2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
TRIML1Q8N9V2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.42■■□□□ 1.5
TRIML1Q8N9V2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIML1Q8N9V2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
TRIML1Q8N9V2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms