Protein–RNA interactions for Protein: Q8N8D7

NKAIN3, Sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKAIN3Q8N8D7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.97■□□□□ 0.63
NKAIN3Q8N8D7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.97■□□□□ 0.63
NKAIN3Q8N8D7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKAIN3Q8N8D7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NKAIN3Q8N8D7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.97■□□□□ 0.63
NKAIN3Q8N8D7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.96■□□□□ 0.63
NKAIN3Q8N8D7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 MIR6722-201ENST00000617286 78 ntBASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
NKAIN3Q8N8D7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.94■□□□□ 0.62
NKAIN3Q8N8D7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKAIN3Q8N8D7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKAIN3Q8N8D7 AC137630.3-201ENST00000607245 391 ntBASIC18.94■□□□□ 0.62
NKAIN3Q8N8D7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NKAIN3Q8N8D7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NKAIN3Q8N8D7 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
NKAIN3Q8N8D7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.94■□□□□ 0.62
NKAIN3Q8N8D7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 DUX4L4-201ENST00000566884 1269 ntBASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
NKAIN3Q8N8D7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 AL137060.1-201ENST00000618151 2648 ntBASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NKAIN3Q8N8D7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
NKAIN3Q8N8D7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 YBX1P4-201ENST00000392794 808 ntBASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 AC010542.4-201ENST00000563151 1910 ntBASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
NKAIN3Q8N8D7 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
NKAIN3Q8N8D7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NKAIN3Q8N8D7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NKAIN3Q8N8D7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms