Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 EI24-204ENST00000527235 1625 ntTSL 5 BASIC17.22■□□□□ 0.35
C3orf56Q8N813 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C3orf56Q8N813 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC17.22■□□□□ 0.35
C3orf56Q8N813 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C3orf56Q8N813 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
C3orf56Q8N813 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.22■□□□□ 0.35
C3orf56Q8N813 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.22■□□□□ 0.35
C3orf56Q8N813 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
C3orf56Q8N813 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
C3orf56Q8N813 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC17.22■□□□□ 0.35
C3orf56Q8N813 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 AC005181.1-201ENST00000604782 1256 ntBASIC17.21■□□□□ 0.35
C3orf56Q8N813 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
C3orf56Q8N813 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
C3orf56Q8N813 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
C3orf56Q8N813 PKM-203ENST00000389093 2279 ntTSL 5 BASIC17.21■□□□□ 0.34
C3orf56Q8N813 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
C3orf56Q8N813 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.2■□□□□ 0.34
C3orf56Q8N813 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.2■□□□□ 0.34
C3orf56Q8N813 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
C3orf56Q8N813 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 KRT18P29-201ENST00000397031 1267 ntBASIC17.2■□□□□ 0.34
C3orf56Q8N813 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 AL138781.1-201ENST00000566567 1274 ntBASIC17.2■□□□□ 0.34
C3orf56Q8N813 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.2■□□□□ 0.34
C3orf56Q8N813 MFSD11-216ENST00000590393 1141 ntBASIC17.2■□□□□ 0.34
C3orf56Q8N813 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.2■□□□□ 0.34
C3orf56Q8N813 AC133041.1-202ENST00000642053 222 ntBASIC17.2■□□□□ 0.34
C3orf56Q8N813 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 LINC01529-204ENST00000636474 1715 ntBASIC17.2■□□□□ 0.34
C3orf56Q8N813 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
C3orf56Q8N813 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C3orf56Q8N813 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C3orf56Q8N813 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C3orf56Q8N813 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C3orf56Q8N813 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C3orf56Q8N813 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.19■□□□□ 0.34
C3orf56Q8N813 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.19■□□□□ 0.34
C3orf56Q8N813 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.19■□□□□ 0.34
C3orf56Q8N813 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.19■□□□□ 0.34
C3orf56Q8N813 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
C3orf56Q8N813 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC17.19■□□□□ 0.34
C3orf56Q8N813 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.19■□□□□ 0.34
C3orf56Q8N813 CEBPA-AS1-201ENST00000592982 2198 ntBASIC17.19■□□□□ 0.34
C3orf56Q8N813 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
C3orf56Q8N813 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
C3orf56Q8N813 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.19■□□□□ 0.34
C3orf56Q8N813 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C3orf56Q8N813 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C3orf56Q8N813 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C3orf56Q8N813 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C3orf56Q8N813 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C3orf56Q8N813 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.18■□□□□ 0.34
C3orf56Q8N813 AC087239.1-201ENST00000622671 572 ntBASIC17.18■□□□□ 0.34
C3orf56Q8N813 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C3orf56Q8N813 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
C3orf56Q8N813 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
C3orf56Q8N813 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
C3orf56Q8N813 HLA-L-211ENST00000482052 1765 ntBASIC17.17■□□□□ 0.34
C3orf56Q8N813 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
C3orf56Q8N813 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
C3orf56Q8N813 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms