Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CPSF7Q8N684 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF7Q8N684 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CPSF7Q8N684 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
CPSF7Q8N684 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.46■■□□□ 1.03
CPSF7Q8N684 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.46■■□□□ 1.03
CPSF7Q8N684 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.46■■□□□ 1.03
CPSF7Q8N684 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CPSF7Q8N684 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.46■■□□□ 1.03
CPSF7Q8N684 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CPSF7Q8N684 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.46■■□□□ 1.03
CPSF7Q8N684 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPSF7Q8N684 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.45■■□□□ 1.02
CPSF7Q8N684 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.45■■□□□ 1.02
CPSF7Q8N684 AC092028.1-203ENST00000608262 953 ntBASIC21.45■■□□□ 1.02
CPSF7Q8N684 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CPSF7Q8N684 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.45■■□□□ 1.02
CPSF7Q8N684 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CPSF7Q8N684 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CPSF7Q8N684 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CPSF7Q8N684 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF7Q8N684 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF7Q8N684 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.44■■□□□ 1.02
CPSF7Q8N684 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CPSF7Q8N684 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.44■■□□□ 1.02
CPSF7Q8N684 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.44■■□□□ 1.02
CPSF7Q8N684 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.44■■□□□ 1.02
CPSF7Q8N684 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.44■■□□□ 1.02
CPSF7Q8N684 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CPSF7Q8N684 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF7Q8N684 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF7Q8N684 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF7Q8N684 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CPSF7Q8N684 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF7Q8N684 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.43■■□□□ 1.02
CPSF7Q8N684 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CPSF7Q8N684 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CPSF7Q8N684 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF7Q8N684 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF7Q8N684 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CPSF7Q8N684 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF7Q8N684 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF7Q8N684 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CPSF7Q8N684 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF7Q8N684 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF7Q8N684 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CPSF7Q8N684 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
CPSF7Q8N684 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.43■■□□□ 1.02
CPSF7Q8N684 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF7Q8N684 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.43■■□□□ 1.02
CPSF7Q8N684 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CPSF7Q8N684 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF7Q8N684 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF7Q8N684 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF7Q8N684 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.42■■□□□ 1.02
CPSF7Q8N684 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CPSF7Q8N684 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.42■■□□□ 1.02
CPSF7Q8N684 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.42■■□□□ 1.02
CPSF7Q8N684 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.42■■□□□ 1.02
CPSF7Q8N684 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF7Q8N684 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
CPSF7Q8N684 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CPSF7Q8N684 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.41■■□□□ 1.02
CPSF7Q8N684 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF7Q8N684 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CPSF7Q8N684 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF7Q8N684 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.4■■□□□ 1.02
CPSF7Q8N684 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF7Q8N684 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF7Q8N684 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CPSF7Q8N684 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.39■■□□□ 1.02
CPSF7Q8N684 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPSF7Q8N684 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.39■■□□□ 1.01
CPSF7Q8N684 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CPSF7Q8N684 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.39■■□□□ 1.01
CPSF7Q8N684 AC004448.1-201ENST00000458332 883 ntBASIC21.39■■□□□ 1.01
CPSF7Q8N684 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
CPSF7Q8N684 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CPSF7Q8N684 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.39■■□□□ 1.01
CPSF7Q8N684 AF131216.4-201ENST00000638924 1588 ntBASIC21.39■■□□□ 1.01
CPSF7Q8N684 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CPSF7Q8N684 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF7Q8N684 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF7Q8N684 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF7Q8N684 AC008406.3-201ENST00000620001 1374 ntBASIC21.38■■□□□ 1.01
CPSF7Q8N684 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF7Q8N684 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CPSF7Q8N684 AC026310.3-201ENST00000625186 2373 ntBASIC21.38■■□□□ 1.01
CPSF7Q8N684 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
CPSF7Q8N684 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms