Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00311Q8N616 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00311Q8N616 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC00311Q8N616 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC00311Q8N616 AC068587.7-201ENST00000641602 218 ntBASIC17.87■□□□□ 0.45
LINC00311Q8N616 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.87■□□□□ 0.45
LINC00311Q8N616 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.87■□□□□ 0.45
LINC00311Q8N616 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00311Q8N616 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
LINC00311Q8N616 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00311Q8N616 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00311Q8N616 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LINC00311Q8N616 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00311Q8N616 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
LINC00311Q8N616 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
LINC00311Q8N616 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00311Q8N616 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00311Q8N616 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00311Q8N616 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
LINC00311Q8N616 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00311Q8N616 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00311Q8N616 AC136469.2-201ENST00000623944 1028 ntBASIC17.86■□□□□ 0.45
LINC00311Q8N616 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00311Q8N616 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC00311Q8N616 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.86■□□□□ 0.45
LINC00311Q8N616 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
LINC00311Q8N616 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00311Q8N616 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.85■□□□□ 0.45
LINC00311Q8N616 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
LINC00311Q8N616 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00311Q8N616 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.85■□□□□ 0.45
LINC00311Q8N616 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
LINC00311Q8N616 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00311Q8N616 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00311Q8N616 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LINC00311Q8N616 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00311Q8N616 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC00311Q8N616 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LINC00311Q8N616 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
LINC00311Q8N616 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.84■□□□□ 0.45
LINC00311Q8N616 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.84■□□□□ 0.45
LINC00311Q8N616 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.84■□□□□ 0.45
LINC00311Q8N616 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00311Q8N616 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00311Q8N616 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00311Q8N616 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
LINC00311Q8N616 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00311Q8N616 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
LINC00311Q8N616 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
LINC00311Q8N616 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
LINC00311Q8N616 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.83■□□□□ 0.45
LINC00311Q8N616 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00311Q8N616 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00311Q8N616 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00311Q8N616 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
LINC00311Q8N616 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00311Q8N616 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00311Q8N616 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
LINC00311Q8N616 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00311Q8N616 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC00311Q8N616 AC079834.2-201ENST00000609776 1949 ntBASIC17.82■□□□□ 0.44
LINC00311Q8N616 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00311Q8N616 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00311Q8N616 AC008406.3-201ENST00000620001 1374 ntBASIC17.82■□□□□ 0.44
LINC00311Q8N616 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00311Q8N616 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00311Q8N616 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.82■□□□□ 0.44
LINC00311Q8N616 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
LINC00311Q8N616 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.82■□□□□ 0.44
LINC00311Q8N616 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00311Q8N616 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00311Q8N616 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00311Q8N616 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
LINC00311Q8N616 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
LINC00311Q8N616 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00311Q8N616 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00311Q8N616 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00311Q8N616 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00311Q8N616 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
LINC00311Q8N616 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.81■□□□□ 0.44
LINC00311Q8N616 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00311Q8N616 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00311Q8N616 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
LINC00311Q8N616 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 AC137767.1-201ENST00000602918 1920 ntBASIC17.8■□□□□ 0.44
LINC00311Q8N616 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.8■□□□□ 0.44
LINC00311Q8N616 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
LINC00311Q8N616 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC00311Q8N616 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.8■□□□□ 0.44
LINC00311Q8N616 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
LINC00311Q8N616 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms