Protein–RNA interactions for Protein: Q8N309

LRRC43, Leucine-rich repeat-containing protein 43, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC43Q8N309 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
LRRC43Q8N309 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LRRC43Q8N309 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
LRRC43Q8N309 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 AC020928.2-201ENST00000588717 2197 ntBASIC23.78■■□□□ 1.4
LRRC43Q8N309 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 AC079630.1-202ENST00000618127 1840 ntBASIC23.78■■□□□ 1.4
LRRC43Q8N309 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.78■■□□□ 1.4
LRRC43Q8N309 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.78■■□□□ 1.4
LRRC43Q8N309 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.78■■□□□ 1.4
LRRC43Q8N309 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC23.78■■□□□ 1.4
LRRC43Q8N309 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.78■■□□□ 1.4
LRRC43Q8N309 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LRRC43Q8N309 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
LRRC43Q8N309 LINC00543-201ENST00000567234 1845 ntBASIC23.77■■□□□ 1.4
LRRC43Q8N309 AC004687.1-201ENST00000579003 1625 ntBASIC23.77■■□□□ 1.4
LRRC43Q8N309 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC43Q8N309 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.77■■□□□ 1.4
LRRC43Q8N309 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.77■■□□□ 1.4
LRRC43Q8N309 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
LRRC43Q8N309 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.77■■□□□ 1.4
LRRC43Q8N309 AC068587.7-201ENST00000641602 218 ntBASIC23.77■■□□□ 1.4
LRRC43Q8N309 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC43Q8N309 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
LRRC43Q8N309 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
LRRC43Q8N309 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
LRRC43Q8N309 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC43Q8N309 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC43Q8N309 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC43Q8N309 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC43Q8N309 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRC43Q8N309 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRC43Q8N309 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC43Q8N309 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.76■■□□□ 1.39
LRRC43Q8N309 TPRG1LP1-201ENST00000598702 760 ntBASIC23.76■■□□□ 1.39
LRRC43Q8N309 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC43Q8N309 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LRRC43Q8N309 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC43Q8N309 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
LRRC43Q8N309 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC43Q8N309 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.75■■□□□ 1.39
LRRC43Q8N309 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.75■■□□□ 1.39
LRRC43Q8N309 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC43Q8N309 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LRRC43Q8N309 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
LRRC43Q8N309 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.75■■□□□ 1.39
LRRC43Q8N309 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.74■■□□□ 1.39
LRRC43Q8N309 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC43Q8N309 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
LRRC43Q8N309 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC43Q8N309 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LRRC43Q8N309 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.74■■□□□ 1.39
LRRC43Q8N309 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.74■■□□□ 1.39
LRRC43Q8N309 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
LRRC43Q8N309 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
LRRC43Q8N309 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC43Q8N309 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.73■■□□□ 1.39
LRRC43Q8N309 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC43Q8N309 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
LRRC43Q8N309 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.73■■□□□ 1.39
LRRC43Q8N309 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC43Q8N309 LINC01124-201ENST00000409786 2117 ntBASIC23.73■■□□□ 1.39
LRRC43Q8N309 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.73■■□□□ 1.39
LRRC43Q8N309 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.73■■□□□ 1.39
LRRC43Q8N309 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
LRRC43Q8N309 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
LRRC43Q8N309 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
LRRC43Q8N309 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.72■■□□□ 1.39
LRRC43Q8N309 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.72■■□□□ 1.39
LRRC43Q8N309 AC087239.1-201ENST00000622671 572 ntBASIC23.72■■□□□ 1.39
LRRC43Q8N309 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.72■■□□□ 1.39
LRRC43Q8N309 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC43Q8N309 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC43Q8N309 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
LRRC43Q8N309 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC43Q8N309 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRC43Q8N309 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRC43Q8N309 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRC43Q8N309 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC43Q8N309 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC43Q8N309 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.71■■□□□ 1.39
LRRC43Q8N309 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.71■■□□□ 1.39
LRRC43Q8N309 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.71■■□□□ 1.39
LRRC43Q8N309 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC43Q8N309 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
LRRC43Q8N309 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
LRRC43Q8N309 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.7■■□□□ 1.38
LRRC43Q8N309 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.7■■□□□ 1.38
LRRC43Q8N309 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC43Q8N309 ID1-201ENST00000376105 1233 ntBASIC23.7■■□□□ 1.38
LRRC43Q8N309 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
LRRC43Q8N309 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC23.7■■□□□ 1.38
LRRC43Q8N309 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms