Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00528Q8N1L1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC14.35□□□□□ -0.11
LINC00528Q8N1L1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
LINC00528Q8N1L1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
LINC00528Q8N1L1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 C1orf229-201ENST00000623686 2258 ntBASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 SERBP1P1-201ENST00000396021 1160 ntBASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 AC010740.1-201ENST00000417035 684 ntBASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
LINC00528Q8N1L1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
LINC00528Q8N1L1 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00528Q8N1L1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
LINC00528Q8N1L1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
LINC00528Q8N1L1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 MAG-206ENST00000597035 542 ntTSL 4 BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 AC099791.2-201ENST00000605725 427 ntBASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 MIR6821-201ENST00000617625 74 ntBASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 LINC00526-201ENST00000581067 1875 ntBASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 RASA4CP-201ENST00000424092 1398 ntBASIC14.33□□□□□ -0.12
LINC00528Q8N1L1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 AC008764.7-201ENST00000593779 1081 ntBASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 AC127496.7-201ENST00000625110 1798 ntBASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 AL161729.1-201ENST00000604104 1402 ntBASIC14.32□□□□□ -0.12
LINC00528Q8N1L1 MGA-212ENST00000619521 1496 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 GUSBP5-202ENST00000510805 1989 ntBASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 AC097381.1-201ENST00000429019 1296 ntBASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 AL139317.3-201ENST00000555969 898 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC00528Q8N1L1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00528Q8N1L1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00528Q8N1L1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00528Q8N1L1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00528Q8N1L1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC00528Q8N1L1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC00528Q8N1L1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC00528Q8N1L1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms