Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 AC006455.2-201ENST00000429931 906 ntBASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ZNF440Q8IYI8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.08■□□□□ 0.81
ZNF440Q8IYI8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF440Q8IYI8 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.08■□□□□ 0.8
ZNF440Q8IYI8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 DUX4L19-201ENST00000557448 1267 ntBASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 LINC00526-201ENST00000581067 1875 ntBASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
ZNF440Q8IYI8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 MIR3181-201ENST00000578512 73 ntBASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 CA15P2-201ENST00000611168 834 ntBASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF440Q8IYI8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF440Q8IYI8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 AL138724.1-201ENST00000606771 1088 ntBASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF440Q8IYI8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF440Q8IYI8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms