Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.61■■□□□ 1.05
LRRTM4Q86VH4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 AL031602.1-201ENST00000633169 911 ntBASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.6■■□□□ 1.05
LRRTM4Q86VH4 IRS3P-201ENST00000223076 1006 ntBASIC21.59■■□□□ 1.05
LRRTM4Q86VH4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRTM4Q86VH4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.59■■□□□ 1.05
LRRTM4Q86VH4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.59■■□□□ 1.05
LRRTM4Q86VH4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.59■■□□□ 1.05
LRRTM4Q86VH4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
LRRTM4Q86VH4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRTM4Q86VH4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRTM4Q86VH4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.58■■□□□ 1.05
LRRTM4Q86VH4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.58■■□□□ 1.05
LRRTM4Q86VH4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
LRRTM4Q86VH4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.58■■□□□ 1.05
LRRTM4Q86VH4 AC087239.1-201ENST00000622671 572 ntBASIC21.58■■□□□ 1.05
LRRTM4Q86VH4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
LRRTM4Q86VH4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
LRRTM4Q86VH4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
LRRTM4Q86VH4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
LRRTM4Q86VH4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.55■■□□□ 1.04
LRRTM4Q86VH4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
LRRTM4Q86VH4 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRTM4Q86VH4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRRTM4Q86VH4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.55■■□□□ 1.04
LRRTM4Q86VH4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
LRRTM4Q86VH4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRTM4Q86VH4 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRRTM4Q86VH4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 MIR572-201ENST00000384983 95 ntBASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 AC010141.3-201ENST00000456659 717 ntBASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 LINC01960-201ENST00000563759 1884 ntBASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.54■■□□□ 1.04
LRRTM4Q86VH4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRRTM4Q86VH4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRRTM4Q86VH4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms