Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
USP48Q86UV5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
USP48Q86UV5 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.93■■□□□ 1.9
USP48Q86UV5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
USP48Q86UV5 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
USP48Q86UV5 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.92■■□□□ 1.9
USP48Q86UV5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC26.92■■□□□ 1.9
USP48Q86UV5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC26.92■■□□□ 1.9
USP48Q86UV5 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
USP48Q86UV5 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.92■■□□□ 1.9
USP48Q86UV5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.92■■□□□ 1.9
USP48Q86UV5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
USP48Q86UV5 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
USP48Q86UV5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC26.91■■□□□ 1.9
USP48Q86UV5 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
USP48Q86UV5 C9orf163-202ENST00000624034 2573 ntBASIC26.91■■□□□ 1.9
USP48Q86UV5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP48Q86UV5 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP48Q86UV5 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP48Q86UV5 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
USP48Q86UV5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.9■■□□□ 1.9
USP48Q86UV5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
USP48Q86UV5 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.9■■□□□ 1.9
USP48Q86UV5 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP48Q86UV5 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP48Q86UV5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
USP48Q86UV5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
USP48Q86UV5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
USP48Q86UV5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
USP48Q86UV5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
USP48Q86UV5 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
USP48Q86UV5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
USP48Q86UV5 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.89
USP48Q86UV5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.89■■□□□ 1.89
USP48Q86UV5 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
USP48Q86UV5 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
USP48Q86UV5 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
USP48Q86UV5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
USP48Q86UV5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC26.88■■□□□ 1.89
USP48Q86UV5 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP48Q86UV5 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP48Q86UV5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
USP48Q86UV5 RAP2CP1-201ENST00000605103 478 ntBASIC26.88■■□□□ 1.89
USP48Q86UV5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC26.88■■□□□ 1.89
USP48Q86UV5 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP48Q86UV5 ESRRAP2-201ENST00000418437 1549 ntBASIC26.88■■□□□ 1.89
USP48Q86UV5 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP48Q86UV5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.88■■□□□ 1.89
USP48Q86UV5 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
USP48Q86UV5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC26.88■■□□□ 1.89
USP48Q86UV5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
USP48Q86UV5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.87■■□□□ 1.89
USP48Q86UV5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
USP48Q86UV5 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
USP48Q86UV5 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
USP48Q86UV5 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
USP48Q86UV5 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
USP48Q86UV5 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.87■■□□□ 1.89
USP48Q86UV5 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
USP48Q86UV5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.87■■□□□ 1.89
USP48Q86UV5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
USP48Q86UV5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
USP48Q86UV5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
USP48Q86UV5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.87■■□□□ 1.89
USP48Q86UV5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.86■■□□□ 1.89
USP48Q86UV5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
USP48Q86UV5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
USP48Q86UV5 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.86■■□□□ 1.89
USP48Q86UV5 CDCA4P2-201ENST00000441182 718 ntBASIC26.86■■□□□ 1.89
USP48Q86UV5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
USP48Q86UV5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
USP48Q86UV5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC26.86■■□□□ 1.89
USP48Q86UV5 AC010525.1-201ENST00000585559 441 ntBASIC26.86■■□□□ 1.89
USP48Q86UV5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
USP48Q86UV5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.86■■□□□ 1.89
USP48Q86UV5 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
USP48Q86UV5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
USP48Q86UV5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
USP48Q86UV5 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
USP48Q86UV5 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
USP48Q86UV5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
USP48Q86UV5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
USP48Q86UV5 ABHD17AP1-201ENST00000358206 933 ntBASIC26.85■■□□□ 1.89
USP48Q86UV5 AC006015.1-201ENST00000429970 570 ntBASIC26.85■■□□□ 1.89
USP48Q86UV5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC26.85■■□□□ 1.89
USP48Q86UV5 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC26.85■■□□□ 1.89
USP48Q86UV5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC26.85■■□□□ 1.89
USP48Q86UV5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
USP48Q86UV5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC26.85■■□□□ 1.89
USP48Q86UV5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC26.85■■□□□ 1.89
USP48Q86UV5 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
USP48Q86UV5 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
USP48Q86UV5 AC133637.1-201ENST00000624115 1537 ntBASIC26.85■■□□□ 1.89
USP48Q86UV5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
USP48Q86UV5 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
USP48Q86UV5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.84■■□□□ 1.89
USP48Q86UV5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
USP48Q86UV5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.84■■□□□ 1.89
USP48Q86UV5 KRT18P61-201ENST00000585825 1298 ntBASIC26.84■■□□□ 1.89
USP48Q86UV5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.84■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms