Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 LINC01529-204ENST00000636474 1715 ntBASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 BHLHE23-202ENST00000612929 1109 ntBASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRTM1Q86UE6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 LINC01960-201ENST00000563759 1884 ntBASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 HSD17B1P1-201ENST00000590052 955 ntBASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRTM1Q86UE6 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 AC074183.2-201ENST00000623112 922 ntBASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 FP325331.1-202ENST00000623531 1380 ntBASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
LRRTM1Q86UE6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM1Q86UE6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM1Q86UE6 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM1Q86UE6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
LRRTM1Q86UE6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
LRRTM1Q86UE6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.02■□□□□ 0.64
LRRTM1Q86UE6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.02■□□□□ 0.64
LRRTM1Q86UE6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
LRRTM1Q86UE6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LRRTM1Q86UE6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRTM1Q86UE6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
LRRTM1Q86UE6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
LRRTM1Q86UE6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.02■□□□□ 0.63
LRRTM1Q86UE6 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LRRTM1Q86UE6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19■□□□□ 0.63
LRRTM1Q86UE6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM1Q86UE6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRRTM1Q86UE6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM1Q86UE6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19■□□□□ 0.63
LRRTM1Q86UE6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM1Q86UE6 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM1Q86UE6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM1Q86UE6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRRTM1Q86UE6 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 AC010980.1-201ENST00000587192 1142 ntBASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 NTF6A-201ENST00000591175 560 ntBASIC18.99■□□□□ 0.63
LRRTM1Q86UE6 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms