Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.95■■□□□ 1.1
LDB1Q86U70 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LDB1Q86U70 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LDB1Q86U70 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.95■■□□□ 1.1
LDB1Q86U70 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LDB1Q86U70 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LDB1Q86U70 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.95■■□□□ 1.1
LDB1Q86U70 AL499627.2-201ENST00000606283 725 ntBASIC21.95■■□□□ 1.1
LDB1Q86U70 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LDB1Q86U70 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LDB1Q86U70 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.95■■□□□ 1.1
LDB1Q86U70 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LDB1Q86U70 AC080038.3-201ENST00000623346 1952 ntBASIC21.94■■□□□ 1.1
LDB1Q86U70 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.94■■□□□ 1.1
LDB1Q86U70 SRD5A1P1-201ENST00000442297 786 ntBASIC21.94■■□□□ 1.1
LDB1Q86U70 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
LDB1Q86U70 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LDB1Q86U70 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
LDB1Q86U70 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LDB1Q86U70 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LDB1Q86U70 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.94■■□□□ 1.1
LDB1Q86U70 ESRRAP2-201ENST00000418437 1549 ntBASIC21.94■■□□□ 1.1
LDB1Q86U70 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
LDB1Q86U70 AC079834.2-201ENST00000609776 1949 ntBASIC21.94■■□□□ 1.1
LDB1Q86U70 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.94■■□□□ 1.1
LDB1Q86U70 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LDB1Q86U70 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LDB1Q86U70 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LDB1Q86U70 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB1Q86U70 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
LDB1Q86U70 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB1Q86U70 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB1Q86U70 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.93■■□□□ 1.1
LDB1Q86U70 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB1Q86U70 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.93■■□□□ 1.1
LDB1Q86U70 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.93■■□□□ 1.1
LDB1Q86U70 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.93■■□□□ 1.1
LDB1Q86U70 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB1Q86U70 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
LDB1Q86U70 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 LINC01960-201ENST00000563759 1884 ntBASIC21.92■■□□□ 1.1
LDB1Q86U70 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
LDB1Q86U70 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
LDB1Q86U70 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.92■■□□□ 1.1
LDB1Q86U70 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
LDB1Q86U70 AC131212.1-201ENST00000613771 668 ntBASIC21.92■■□□□ 1.1
LDB1Q86U70 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
LDB1Q86U70 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
LDB1Q86U70 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
LDB1Q86U70 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LDB1Q86U70 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LDB1Q86U70 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
LDB1Q86U70 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LDB1Q86U70 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LDB1Q86U70 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.9■■□□□ 1.1
LDB1Q86U70 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LDB1Q86U70 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LDB1Q86U70 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LDB1Q86U70 AC127496.7-201ENST00000625110 1798 ntBASIC21.9■■□□□ 1.1
LDB1Q86U70 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LDB1Q86U70 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.9■■□□□ 1.1
LDB1Q86U70 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.9■■□□□ 1.1
LDB1Q86U70 MIR3181-201ENST00000578512 73 ntBASIC21.9■■□□□ 1.1
LDB1Q86U70 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.9■■□□□ 1.1
LDB1Q86U70 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
LDB1Q86U70 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LDB1Q86U70 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LDB1Q86U70 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LDB1Q86U70 AC133637.1-201ENST00000624115 1537 ntBASIC21.9■■□□□ 1.1
LDB1Q86U70 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LDB1Q86U70 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LDB1Q86U70 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LDB1Q86U70 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LDB1Q86U70 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LDB1Q86U70 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LDB1Q86U70 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.89■■□□□ 1.09
LDB1Q86U70 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LDB1Q86U70 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LDB1Q86U70 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LDB1Q86U70 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LDB1Q86U70 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LDB1Q86U70 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LDB1Q86U70 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LDB1Q86U70 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
LDB1Q86U70 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LDB1Q86U70 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LDB1Q86U70 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
LDB1Q86U70 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.88■■□□□ 1.09
LDB1Q86U70 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LDB1Q86U70 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LDB1Q86U70 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.88■■□□□ 1.09
LDB1Q86U70 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms