Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 KRT18P11-201ENST00000435214 1283 ntBASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 MFSD11-216ENST00000590393 1141 ntBASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 AC004812.2-201ENST00000611079 2094 ntBASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC13.74□□□□□ -0.21
VPS13BQ7Z7G8 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 CD99P1-205ENST00000527459 561 ntBASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 AP004607.4-201ENST00000530158 1459 ntBASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VPS13BQ7Z7G8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 DET1-205ENST00000558413 583 ntTSL 4 BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.72□□□□□ -0.21
VPS13BQ7Z7G8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 AC020928.2-201ENST00000588717 2197 ntBASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS13BQ7Z7G8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
VPS13BQ7Z7G8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VPS13BQ7Z7G8 AC098590.1-201ENST00000468126 897 ntBASIC13.71□□□□□ -0.22
VPS13BQ7Z7G8 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC13.7□□□□□ -0.22
VPS13BQ7Z7G8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 244.4 ms