Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RAI1Q7Z5J4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 AC016769.1-201ENST00000409132 1010 ntBASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 RAP2CP1-201ENST00000605103 478 ntBASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RAI1Q7Z5J4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI1Q7Z5J4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAI1Q7Z5J4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RAI1Q7Z5J4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.89■□□□□ 0.61
RAI1Q7Z5J4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.89■□□□□ 0.61
RAI1Q7Z5J4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.89■□□□□ 0.61
RAI1Q7Z5J4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAI1Q7Z5J4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.88■□□□□ 0.61
RAI1Q7Z5J4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 AC105233.4-201ENST00000642045 216 ntBASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RAI1Q7Z5J4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 LINC01529-204ENST00000636474 1715 ntBASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 NTF6G-201ENST00000591094 616 ntBASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.86■□□□□ 0.61
RAI1Q7Z5J4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 AC006015.1-201ENST00000429970 570 ntBASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.85■□□□□ 0.61
RAI1Q7Z5J4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.84■□□□□ 0.61
RAI1Q7Z5J4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms