Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR3Q6ZTQ4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDHR3Q6ZTQ4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDHR3Q6ZTQ4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.08■■□□□ 1.13
CDHR3Q6ZTQ4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.08■■□□□ 1.13
CDHR3Q6ZTQ4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.08■■□□□ 1.13
CDHR3Q6ZTQ4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.08■■□□□ 1.13
CDHR3Q6ZTQ4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDHR3Q6ZTQ4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CDHR3Q6ZTQ4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDHR3Q6ZTQ4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
CDHR3Q6ZTQ4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.08■■□□□ 1.12
CDHR3Q6ZTQ4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDHR3Q6ZTQ4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDHR3Q6ZTQ4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.08■■□□□ 1.12
CDHR3Q6ZTQ4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 MIR3621-201ENST00000580529 85 ntBASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDHR3Q6ZTQ4 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 AC008406.3-201ENST00000620001 1374 ntBASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CDHR3Q6ZTQ4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.05■■□□□ 1.12
CDHR3Q6ZTQ4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 AL356740.2-201ENST00000601559 647 ntBASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 FBXW4P1-201ENST00000426721 2239 ntBASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR3Q6ZTQ4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 AC144652.1-201ENST00000609974 1624 ntBASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 AC131281.2-201ENST00000520478 145 ntBASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR3Q6ZTQ4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDHR3Q6ZTQ4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.02■■□□□ 1.12
CDHR3Q6ZTQ4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDHR3Q6ZTQ4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.02■■□□□ 1.12
CDHR3Q6ZTQ4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.02■■□□□ 1.12
CDHR3Q6ZTQ4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDHR3Q6ZTQ4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDHR3Q6ZTQ4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CDHR3Q6ZTQ4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDHR3Q6ZTQ4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDHR3Q6ZTQ4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.01■■□□□ 1.11
CDHR3Q6ZTQ4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDHR3Q6ZTQ4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDHR3Q6ZTQ4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC22.01■■□□□ 1.11
CDHR3Q6ZTQ4 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDHR3Q6ZTQ4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDHR3Q6ZTQ4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22■■□□□ 1.11
CDHR3Q6ZTQ4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CDHR3Q6ZTQ4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CDHR3Q6ZTQ4 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDHR3Q6ZTQ4 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDHR3Q6ZTQ4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms