Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCRAQ6ISU1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23■■□□□ 1.27
PTCRAQ6ISU1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTCRAQ6ISU1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PTCRAQ6ISU1 PRORSD1P-201ENST00000295112 541 ntBASIC23■■□□□ 1.27
PTCRAQ6ISU1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTCRAQ6ISU1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23■■□□□ 1.27
PTCRAQ6ISU1 AF201337.1-201ENST00000520239 748 ntBASIC23■■□□□ 1.27
PTCRAQ6ISU1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23■■□□□ 1.27
PTCRAQ6ISU1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23■■□□□ 1.27
PTCRAQ6ISU1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTCRAQ6ISU1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23■■□□□ 1.27
PTCRAQ6ISU1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 AC098934.4-201ENST00000564127 592 ntBASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 SMUG1P1-201ENST00000590640 811 ntBASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCRAQ6ISU1 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
PTCRAQ6ISU1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PTCRAQ6ISU1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.98■■□□□ 1.27
PTCRAQ6ISU1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.98■■□□□ 1.27
PTCRAQ6ISU1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.98■■□□□ 1.27
PTCRAQ6ISU1 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
PTCRAQ6ISU1 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.98■■□□□ 1.27
PTCRAQ6ISU1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.98■■□□□ 1.27
PTCRAQ6ISU1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 RNA5SP413-201ENST00000516373 109 ntBASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 AC104187.1-201ENST00000607510 612 ntBASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCRAQ6ISU1 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 RPS2P52-201ENST00000469610 820 ntBASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 AC105036.2-201ENST00000569468 176 ntBASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 UBE2DNL-204ENST00000602536 740 ntBASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.96■■□□□ 1.27
PTCRAQ6ISU1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 AP006294.2-201ENST00000641667 209 ntBASIC22.95■■□□□ 1.26
PTCRAQ6ISU1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCRAQ6ISU1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
PTCRAQ6ISU1 AC144652.1-201ENST00000609974 1624 ntBASIC22.94■■□□□ 1.26
PTCRAQ6ISU1 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCRAQ6ISU1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
PTCRAQ6ISU1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PTCRAQ6ISU1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.92■■□□□ 1.26
PTCRAQ6ISU1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCRAQ6ISU1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCRAQ6ISU1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PTCRAQ6ISU1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.92■■□□□ 1.26
PTCRAQ6ISU1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.92■■□□□ 1.26
PTCRAQ6ISU1 AC068587.7-201ENST00000641602 218 ntBASIC22.92■■□□□ 1.26
PTCRAQ6ISU1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PTCRAQ6ISU1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
PTCRAQ6ISU1 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PTCRAQ6ISU1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.91■■□□□ 1.26
PTCRAQ6ISU1 AC133552.2-202ENST00000575694 574 ntBASIC22.91■■□□□ 1.26
PTCRAQ6ISU1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms