Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 AC241377.3-202ENST00000626088 1088 ntBASIC21.19■□□□□ 0.98
DEPDC1Q5TB30 AC241585.3-202ENST00000628937 1088 ntBASIC21.19■□□□□ 0.98
DEPDC1Q5TB30 AC245100.8-202ENST00000629247 1058 ntBASIC21.19■□□□□ 0.98
DEPDC1Q5TB30 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DEPDC1Q5TB30 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.19■□□□□ 0.98
DEPDC1Q5TB30 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
DEPDC1Q5TB30 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 SLC25A24-204ENST00000569674 2357 ntBASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.18■□□□□ 0.98
DEPDC1Q5TB30 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
DEPDC1Q5TB30 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
DEPDC1Q5TB30 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
DEPDC1Q5TB30 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.14■□□□□ 0.98
DEPDC1Q5TB30 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DEPDC1Q5TB30 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.14■□□□□ 0.98
DEPDC1Q5TB30 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
DEPDC1Q5TB30 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
DEPDC1Q5TB30 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
DEPDC1Q5TB30 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
DEPDC1Q5TB30 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 AL499627.2-201ENST00000606283 725 ntBASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
DEPDC1Q5TB30 AL121603.2-201ENST00000557373 2117 ntBASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 SRD5A1P1-201ENST00000442297 786 ntBASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 AC099791.2-201ENST00000605725 427 ntBASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
DEPDC1Q5TB30 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms