Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
LDLRAP1Q5SW96 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LDLRAP1Q5SW96 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.84■■□□□ 1.09
LDLRAP1Q5SW96 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.84■■□□□ 1.09
LDLRAP1Q5SW96 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.84■■□□□ 1.09
LDLRAP1Q5SW96 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LDLRAP1Q5SW96 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
LDLRAP1Q5SW96 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
LDLRAP1Q5SW96 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.83■■□□□ 1.09
LDLRAP1Q5SW96 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.83■■□□□ 1.09
LDLRAP1Q5SW96 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LDLRAP1Q5SW96 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LDLRAP1Q5SW96 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LDLRAP1Q5SW96 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.83■■□□□ 1.08
LDLRAP1Q5SW96 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LDLRAP1Q5SW96 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.83■■□□□ 1.08
LDLRAP1Q5SW96 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.08
LDLRAP1Q5SW96 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.83■■□□□ 1.08
LDLRAP1Q5SW96 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.83■■□□□ 1.08
LDLRAP1Q5SW96 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 MIR638-201ENST00000385237 100 ntBASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 BX842568.3-201ENST00000418104 571 ntBASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LDLRAP1Q5SW96 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LDLRAP1Q5SW96 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 SLC47A1P1-202ENST00000449666 945 ntBASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 AC233992.3-201ENST00000607491 485 ntBASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 AL031432.3-201ENST00000607698 485 ntBASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 AC005837.3-201ENST00000612163 286 ntBASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LDLRAP1Q5SW96 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.79■■□□□ 1.08
LDLRAP1Q5SW96 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LDLRAP1Q5SW96 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
LDLRAP1Q5SW96 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.79■■□□□ 1.08
LDLRAP1Q5SW96 AP001330.3-201ENST00000520123 633 ntBASIC21.79■■□□□ 1.08
LDLRAP1Q5SW96 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC21.79■■□□□ 1.08
LDLRAP1Q5SW96 AC027682.1-201ENST00000562846 899 ntBASIC21.79■■□□□ 1.08
LDLRAP1Q5SW96 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LDLRAP1Q5SW96 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LDLRAP1Q5SW96 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LDLRAP1Q5SW96 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 SUDS3P1-201ENST00000505831 966 ntBASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 AF213884.3-201ENST00000563833 479 ntBASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 AC142381.2-201ENST00000566120 298 ntBASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 AC010525.1-201ENST00000585559 441 ntBASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 AC008764.7-201ENST00000593779 1081 ntBASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LDLRAP1Q5SW96 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms