Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MIR4758-201ENST00000577688 71 ntBASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RSPO4Q2I0M5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 AC142381.4-202ENST00000563973 229 ntBASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
RSPO4Q2I0M5 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.52■■□□□ 1.03
RSPO4Q2I0M5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.52■■□□□ 1.03
RSPO4Q2I0M5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RSPO4Q2I0M5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 AC133552.2-202ENST00000575694 574 ntBASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.5■■□□□ 1.03
RSPO4Q2I0M5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RSPO4Q2I0M5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.49■■□□□ 1.03
RSPO4Q2I0M5 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.49■■□□□ 1.03
RSPO4Q2I0M5 RARRES2P4-201ENST00000514074 484 ntBASIC21.49■■□□□ 1.03
RSPO4Q2I0M5 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.49■■□□□ 1.03
RSPO4Q2I0M5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.49■■□□□ 1.03
RSPO4Q2I0M5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RSPO4Q2I0M5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 AC010331.1-201ENST00000611423 582 ntBASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RSPO4Q2I0M5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 UBE2DNL-204ENST00000602536 740 ntBASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.47■■□□□ 1.03
RSPO4Q2I0M5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RSPO4Q2I0M5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RSPO4Q2I0M5 ECEL1P3-201ENST00000427961 737 ntBASIC21.46■■□□□ 1.03
RSPO4Q2I0M5 FAM210CP-201ENST00000445714 574 ntBASIC21.46■■□□□ 1.03
RSPO4Q2I0M5 AC104187.1-201ENST00000607510 612 ntBASIC21.46■■□□□ 1.03
RSPO4Q2I0M5 AC092118.2-201ENST00000613495 667 ntBASIC21.46■■□□□ 1.03
RSPO4Q2I0M5 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RSPO4Q2I0M5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RSPO4Q2I0M5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.45■■□□□ 1.02
RSPO4Q2I0M5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms