Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC30.28■■■□□ 2.44
COL16A1Q07092 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
COL16A1Q07092 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL16A1Q07092 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL16A1Q07092 AC105036.2-201ENST00000569468 176 ntBASIC30.28■■■□□ 2.44
COL16A1Q07092 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC30.28■■■□□ 2.44
COL16A1Q07092 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
COL16A1Q07092 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC30.27■■■□□ 2.44
COL16A1Q07092 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
COL16A1Q07092 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.27■■■□□ 2.44
COL16A1Q07092 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC30.26■■■□□ 2.44
COL16A1Q07092 BRI3-207ENST00000539286 699 ntTSL 2 BASIC30.26■■■□□ 2.44
COL16A1Q07092 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC30.26■■■□□ 2.44
COL16A1Q07092 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.44
COL16A1Q07092 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
COL16A1Q07092 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
COL16A1Q07092 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
COL16A1Q07092 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC30.25■■■□□ 2.43
COL16A1Q07092 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC30.25■■■□□ 2.43
COL16A1Q07092 UQCRFS1P1-201ENST00000435169 820 ntBASIC30.25■■■□□ 2.43
COL16A1Q07092 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC30.25■■■□□ 2.43
COL16A1Q07092 MARS-234ENST00000630571 216 ntTSL 5 BASIC30.25■■■□□ 2.43
COL16A1Q07092 MARS-235ENST00000630803 183 ntTSL 3 BASIC30.25■■■□□ 2.43
COL16A1Q07092 AP006294.2-201ENST00000641667 209 ntBASIC30.25■■■□□ 2.43
COL16A1Q07092 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL16A1Q07092 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
COL16A1Q07092 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC30.25■■■□□ 2.43
COL16A1Q07092 ADM-205ENST00000528544 586 ntTSL 2 BASIC30.25■■■□□ 2.43
COL16A1Q07092 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC30.25■■■□□ 2.43
COL16A1Q07092 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL16A1Q07092 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC30.24■■■□□ 2.43
COL16A1Q07092 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL16A1Q07092 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.24■■■□□ 2.43
COL16A1Q07092 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
COL16A1Q07092 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
COL16A1Q07092 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
COL16A1Q07092 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL16A1Q07092 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL16A1Q07092 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC30.24■■■□□ 2.43
COL16A1Q07092 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
COL16A1Q07092 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC30.24■■■□□ 2.43
COL16A1Q07092 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL16A1Q07092 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC30.23■■■□□ 2.43
COL16A1Q07092 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL16A1Q07092 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
COL16A1Q07092 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC30.23■■■□□ 2.43
COL16A1Q07092 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL16A1Q07092 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
COL16A1Q07092 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.23■■■□□ 2.43
COL16A1Q07092 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
COL16A1Q07092 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
COL16A1Q07092 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
COL16A1Q07092 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC30.22■■■□□ 2.43
COL16A1Q07092 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC30.22■■■□□ 2.43
COL16A1Q07092 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
COL16A1Q07092 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC30.22■■■□□ 2.43
COL16A1Q07092 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC30.22■■■□□ 2.43
COL16A1Q07092 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.22■■■□□ 2.43
COL16A1Q07092 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC30.22■■■□□ 2.43
COL16A1Q07092 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
COL16A1Q07092 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
COL16A1Q07092 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
COL16A1Q07092 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL16A1Q07092 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.21■■■□□ 2.43
COL16A1Q07092 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
COL16A1Q07092 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC30.21■■■□□ 2.43
COL16A1Q07092 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
COL16A1Q07092 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
COL16A1Q07092 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.21■■■□□ 2.43
COL16A1Q07092 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL16A1Q07092 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC30.2■■■□□ 2.43
COL16A1Q07092 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.2■■■□□ 2.43
COL16A1Q07092 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
COL16A1Q07092 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
COL16A1Q07092 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
COL16A1Q07092 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
COL16A1Q07092 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
COL16A1Q07092 AC083880.1-201ENST00000608266 535 ntBASIC30.2■■■□□ 2.43
COL16A1Q07092 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.42
COL16A1Q07092 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL16A1Q07092 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL16A1Q07092 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
COL16A1Q07092 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
COL16A1Q07092 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL16A1Q07092 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.18■■■□□ 2.42
COL16A1Q07092 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC30.18■■■□□ 2.42
COL16A1Q07092 CBFB-203ENST00000561924 584 ntTSL 5 BASIC30.18■■■□□ 2.42
COL16A1Q07092 MIR4758-201ENST00000577688 71 ntBASIC30.18■■■□□ 2.42
COL16A1Q07092 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
COL16A1Q07092 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC30.18■■■□□ 2.42
COL16A1Q07092 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL16A1Q07092 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL16A1Q07092 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
COL16A1Q07092 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL16A1Q07092 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC30.18■■■□□ 2.42
COL16A1Q07092 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC30.18■■■□□ 2.42
COL16A1Q07092 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
COL16A1Q07092 CYP2T1P-201ENST00000432607 1285 ntBASIC30.18■■■□□ 2.42
COL16A1Q07092 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC30.18■■■□□ 2.42
COL16A1Q07092 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC30.17■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms