Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CL1P78423 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CL1P78423 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CX3CL1P78423 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.64■□□□□ 0.41
CX3CL1P78423 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CX3CL1P78423 AC131281.2-201ENST00000520478 145 ntBASIC17.64■□□□□ 0.41
CX3CL1P78423 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CL1P78423 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.64■□□□□ 0.41
CX3CL1P78423 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CL1P78423 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.64■□□□□ 0.41
CX3CL1P78423 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CX3CL1P78423 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CL1P78423 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CL1P78423 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.63■□□□□ 0.41
CX3CL1P78423 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CL1P78423 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.63■□□□□ 0.41
CX3CL1P78423 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CL1P78423 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC17.63■□□□□ 0.41
CX3CL1P78423 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.63■□□□□ 0.41
CX3CL1P78423 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
CX3CL1P78423 AC099791.2-201ENST00000605725 427 ntBASIC17.63■□□□□ 0.41
CX3CL1P78423 AC009086.3-201ENST00000623486 1008 ntBASIC17.63■□□□□ 0.41
CX3CL1P78423 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.63■□□□□ 0.41
CX3CL1P78423 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CL1P78423 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CL1P78423 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CL1P78423 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CX3CL1P78423 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CL1P78423 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.62■□□□□ 0.41
CX3CL1P78423 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CL1P78423 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CL1P78423 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CL1P78423 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.62■□□□□ 0.41
CX3CL1P78423 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CL1P78423 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CL1P78423 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.62■□□□□ 0.41
CX3CL1P78423 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.62■□□□□ 0.41
CX3CL1P78423 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CL1P78423 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CL1P78423 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.62■□□□□ 0.41
CX3CL1P78423 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CX3CL1P78423 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CX3CL1P78423 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.61■□□□□ 0.41
CX3CL1P78423 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CX3CL1P78423 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.61■□□□□ 0.41
CX3CL1P78423 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CX3CL1P78423 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.61■□□□□ 0.41
CX3CL1P78423 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 AC092171.4-201ENST00000609130 632 ntBASIC17.61■□□□□ 0.41
CX3CL1P78423 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.61■□□□□ 0.41
CX3CL1P78423 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CX3CL1P78423 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.61■□□□□ 0.41
CX3CL1P78423 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CX3CL1P78423 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CX3CL1P78423 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.6■□□□□ 0.41
CX3CL1P78423 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CX3CL1P78423 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CX3CL1P78423 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.6■□□□□ 0.41
CX3CL1P78423 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.6■□□□□ 0.41
CX3CL1P78423 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.6■□□□□ 0.41
CX3CL1P78423 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.6■□□□□ 0.41
CX3CL1P78423 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CX3CL1P78423 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CX3CL1P78423 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CX3CL1P78423 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CX3CL1P78423 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
CX3CL1P78423 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
CX3CL1P78423 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.59■□□□□ 0.41
CX3CL1P78423 AL136116.3-201ENST00000402907 1138 ntBASIC17.59■□□□□ 0.41
CX3CL1P78423 AC006455.2-201ENST00000429931 906 ntBASIC17.59■□□□□ 0.41
CX3CL1P78423 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.59■□□□□ 0.41
CX3CL1P78423 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CX3CL1P78423 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CX3CL1P78423 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.59■□□□□ 0.41
CX3CL1P78423 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CX3CL1P78423 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.58■□□□□ 0.41
CX3CL1P78423 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms